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Protein Overview: gi|39984708, gi|...

General Information:
Name(s) found: gi|39997816 [NCBI NR]
gi|39984708 [NCBI NR]
Description(s) found:
Found 5 descriptions.
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  • gi|39997816|ref|NP_953767.1| bidirectional hydrogenase complex protein HoxE [Geobacter sulfurreducens PCA] [NCBI NR]
  • gi|39984708|gb|AAR36094.1| NAD-reducing hydrogenase, putative [Geobacter sulfurreducens PCA] [NCBI NR]
    • Organism: Geobacter sulfurreducens PCA
    Length: 191 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NADH metabolic process [ISSLink to PubMed article]
    Molecular Function: oxidoreductase activity, acting on hydrogen as donor, NAD or NADP as acceptor [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSTDNSPGK GTPDGLAADP RFKVVERTLK QYQYRADALL EVLHVAQETF GCLSDELMTH  60
   61 VARQLRVPPS RVYGVATFYH FFTLEARGEH SCVVCTGTAC YVKRSAEIVT RLENEFDVKA 120
  121 GKTTADGKLT LSTVRCLGSC GLAPIVVLDG ETVGRCTPDS AAAAVRVMLA EKSPARAETV 180
  181 RPVRRRKGEG Q

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..191] PSI-BLAST 45.0 Crystal structure of the hydrophilic domain of respiratory complex I from Thermus thermophilus

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • oxidoreductase activity
    		•  4.59229363605361 bayes_pls_golite062009
  • NADH dehydrogenase activity
    		•  3.9375447159208 bayes_pls_golite062009
  • oxidoreductase activity, acting on NADH or NADPH
    		•  3.73276836799107 bayes_pls_golite062009
  • NADH dehydrogenase (ubiquinone) activity
    		•  3.59072384396635 bayes_pls_golite062009
  • NADH dehydrogenase (quinone) activity
    		•  3.49917824668013 bayes_pls_golite062009
  • oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor
    		•  2.91608447803186 bayes_pls_golite062009
  • electron carrier activity
    		•  1.60266992132284 bayes_pls_golite062009
  • catalytic activity
    		•  0.672192331361968 bayes_pls_golite062009
  • protein binding
    		•  0.195947179962724 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle