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Protein Overview: gi|24373814, gi|...

General Information:
Name(s) found: gi|24373814 [NCBI NR]
gi|24348212 [NCBI NR]
Description(s) found:
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  • gi|24373814|ref|NP_717857.1| RNA methyltransferase [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24348212|gb|AAN55301.1|AE015668_2 RNA methyltransferase, TrmH family, group 1 [Shewanella oneidensis MR-1] [NCBI NR]
  • RNA methyltransferase, TrmH family, group 1 [Shewanella oneidensis MR-1]gi|24348212|gb|AAN55301.1| RNA methyltransferase, TrmH family, group 1 [Shewanella oneidensis MR-1] [nrdb_11152004_Chlamydomonas]
  • RNA methyltransferase, TrmH family, group 1 [Shewanella oneidensis MR-1] [nr-271106-contam.fasta]
    • Organism: Shewanella oneidensis MR-1
    Length: 241 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: RNA methylation [ISSLink to PubMed article]
    Molecular Function: RNA methyltransferase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSNIRVILV GTSHPGNIGS TARAMKTMGL STLYLAEPRC EVDGQSIALA AGASDILKHL  60
   61 VKVDSLQEAI ADCSLVIATS ARSRTLDWPM LEPREAGQKL VTEGITGPVA IVFGRENHGL 120
  121 TNEELQQCTY HVAIPANPEY SSLNLAQAVQ IICYETRVAH LAQMEAPQAV EEYPLSADLE 180
  181 RFFVHLESTL SSTGFIIKNH PGQVMTKLRR MFSRARIESQ EMNILRGILT SIDKVVGNKQ 240
  241 K

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..241] PSI-BLAST 29.154902 Crystal Structure of A. aeolicus TrmH/SpoU tRNA modifying enzyme


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.70

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle