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Protein Overview: gi|24373384, gi|...

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

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[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..690] PSI-BLAST 57.39794 No description for 2fdcA was found.

Functions predicted (by domain):

# Gene Ontology predictions
1
Term Confidence Notes
  • general RNA polymerase II transcription factor activity
  • 2.8600635241996 bayes_pls_golite062009
  • deoxyribonuclease activity
  • 2.72222787956584 bayes_pls_golite062009
  • binding
  • 2.64537357529343 bayes_pls_golite062009
  • endodeoxyribonuclease activity
  • 2.60873257753475 bayes_pls_golite062009
  • hydrolase activity
  • 2.55157966585974 bayes_pls_golite062009
  • dATP binding
  • 2.44149059794577 bayes_pls_golite062009
  • nucleic acid binding
  • 2.21184938313192 bayes_pls_golite062009
  • pyrophosphatase activity
  • 2.13284212711072 bayes_pls_golite062009
  • transcription regulator activity
  • 2.09345198747025 bayes_pls_golite062009
  • endonuclease activity
  • 1.96689197136388 bayes_pls_golite062009
  • DNA binding
  • 1.94055378599526 bayes_pls_golite062009
  • helicase activity
  • 1.70242731830224 bayes_pls_golite062009
  • RNA helicase activity
  • 1.63960194106079 bayes_pls_golite062009
  • ATP-dependent RNA helicase activity
  • 1.61735400124552 bayes_pls_golite062009
  • RNA-dependent ATPase activity
  • 1.60404584546501 bayes_pls_golite062009
  • purine deoxyribonucleotide binding
  • 1.4428455823518 bayes_pls_golite062009
  • adenyl deoxyribonucleotide binding
  • 1.4428455823518 bayes_pls_golite062009
  • structure-specific DNA binding
  • 1.2539059700735 bayes_pls_golite062009
  • DNA-dependent ATPase activity
  • 1.2155186842031 bayes_pls_golite062009
  • purine NTP-dependent helicase activity
  • 1.19311444180077 bayes_pls_golite062009
  • ATP-dependent helicase activity
  • 1.19311444180077 bayes_pls_golite062009
  • ATP-dependent DNA helicase activity
  • 1.18669029764243 bayes_pls_golite062009
  • double-stranded DNA binding
  • 1.117585097627 bayes_pls_golite062009
  • catalytic activity
  • 1.00104173493322 bayes_pls_golite062009
  • DNA helicase activity
  • 0.72881469450553 bayes_pls_golite062009
  • transcription factor activity
  • 0.682439846757997 bayes_pls_golite062009
  • single-stranded DNA binding
  • 0.568457189190858 bayes_pls_golite062009
  • mismatched DNA binding
  • 0.31144582840038 bayes_pls_golite062009
  • DNA strand annealing activity
  • 0.283577486331079 bayes_pls_golite062009
  • four-way junction helicase activity
  • 0.26252931460003 bayes_pls_golite062009
  • RNA polymerase II transcription factor activity
  • 0.243902356228423 bayes_pls_golite062009
  • exodeoxyribonuclease V activity
  • 0.185603938981231 bayes_pls_golite062009
  • nucleotidyltransferase activity
  • 0.181509771587324 bayes_pls_golite062009
  • protein binding
  • 0.170837278876362 bayes_pls_golite062009
  • nucleoside-triphosphatase activity
  • 0.147579541298736 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
  • 0.141364252067841 bayes_pls_golite062009
  • nucleotide binding
  • 0.114848452385726 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides
  • 0.113504049290503 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
  • 0.111293884322157 bayes_pls_golite062009
  • purine nucleotide binding
  • 0.10713474095071 bayes_pls_golite062009
  • purine ribonucleotide binding
  • 0.0916519414118148 bayes_pls_golite062009
  • ribonucleotide binding
  • 0.0915913646217636 bayes_pls_golite062009




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle