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Protein Overview: VPS36_YEAST

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..147] deduced N/A No confident structure predictions are available.
2 View Details [148..566] MSA 3.010891 View MSA. No confident structure predictions are available.

Functions predicted (by domain):

# Gene Ontology predictions
1
Term Confidence Notes
  • transcription regulator activity
  • 4.95502209146398 bayes_pls_golite062009
  • DNA binding
  • 4.49877554292304 bayes_pls_golite062009
  • nucleic acid binding
  • 4.4138116788102 bayes_pls_golite062009
  • transcription factor activity
  • 3.78905634607011 bayes_pls_golite062009
  • transcription repressor activity
  • 3.35896772348591 bayes_pls_golite062009
  • binding
  • 3.09940998297931 bayes_pls_golite062009
  • RNA polymerase II transcription factor activity
  • 2.10135825467854 bayes_pls_golite062009
  • sequence-specific DNA binding
  • 1.97423148823534 bayes_pls_golite062009
  • transcription activator activity
  • 1.86787909680028 bayes_pls_golite062009
  • protein binding
  • 0.753698599635855 bayes_pls_golite062009
  • molecular transducer activity
  • 0.574575108509588 bayes_pls_golite062009
  • signal transducer activity
  • 0.574575108509588 bayes_pls_golite062009
  • specific transcriptional repressor activity
  • 0.51900654743421 bayes_pls_golite062009
  • transcription factor binding
  • 0.35726633913804 bayes_pls_golite062009
  • specific RNA polymerase II transcription factor activity
  • 0.18158516638045 bayes_pls_golite062009
  • hydrolase activity
  • 0.140191206949582 bayes_pls_golite062009
  • ubiquitin-protein ligase activity
  • 0.136726704233672 bayes_pls_golite062009
  • small conjugating protein ligase activity
  • 0.118016217031359 bayes_pls_golite062009
  • structure-specific DNA binding
  • 0.0384502189988831 bayes_pls_golite062009
    2 No functions predicted.




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle