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Protein Overview: ATG8C_ARATH

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

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[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..119] PSI-BLAST 58.522879 Golgi-associated ATPase enhancer of 16 kD, Gate-16

Functions predicted (by domain):

# Gene Ontology predictions
1
Term Confidence Notes
  • tubulin binding
  • 3.8719684227967 bayes_pls_golite062009
  • small conjugating protein ligase activity
  • 3.71144418714309 bayes_pls_golite062009
  • microtubule binding
  • 3.61517229466799 bayes_pls_golite062009
  • ubiquitin-protein ligase activity
  • 3.30801071565148 bayes_pls_golite062009
  • cytoskeletal protein binding
  • 3.11253399564789 bayes_pls_golite062009
  • beta-tubulin binding
  • 2.878827078106 bayes_pls_golite062009
  • binding
  • 2.786655943372 bayes_pls_golite062009
  • acid-amino acid ligase activity
  • 2.72499875710239 bayes_pls_golite062009
  • GABA receptor binding
  • 2.41579236188889 bayes_pls_golite062009
  • protein tag
  • 2.15059229834935 bayes_pls_golite062009
  • protein binding
  • 1.86841453215444 bayes_pls_golite062009
  • transcription regulator activity
  • 1.42747465816672 bayes_pls_golite062009
  • nucleic acid binding
  • 1.32707653701567 bayes_pls_golite062009
  • DNA binding
  • 1.22622447288034 bayes_pls_golite062009
  • molecular transducer activity
  • 0.87452559909702 bayes_pls_golite062009
  • signal transducer activity
  • 0.87452559909702 bayes_pls_golite062009
  • SUMO ligase activity
  • 0.80391127659342 bayes_pls_golite062009
  • hydrolase activity
  • 0.79940718386175 bayes_pls_golite062009
  • ligase activity, forming carbon-nitrogen bonds
  • 0.753885975469065 bayes_pls_golite062009
  • structural constituent of ribosome
  • 0.599634454232833 bayes_pls_golite062009
  • structural molecule activity
  • 0.576819726104993 bayes_pls_golite062009
  • phosphotransferase activity, alcohol group as acceptor
  • 0.536856055841234 bayes_pls_golite062009
  • kinase activity
  • 0.506057697290914 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
  • 0.410719674374641 bayes_pls_golite062009
  • protein kinase activity
  • 0.325253662829604 bayes_pls_golite062009
  • enzyme binding
  • 0.240262781026149 bayes_pls_golite062009
  • transferase activity
  • 0.236208643697075 bayes_pls_golite062009




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle