General Information: |
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Name(s) found: |
gi|50355723
[NCBI NR]
gi|115455785 [NCBI NR] gi|113549964 [NCBI NR] gi|108711444 [NCBI NR] |
Description(s) found:
SHOW ONLY BEST |
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Organism: | Oryza sativa Japonica Group |
Length: | 1259 amino acids |
Gene Ontology: |
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Cellular Component: | NONE FOUND |
Biological Process: | NONE FOUND |
Molecular Function: | NONE FOUND |
Sequence: |
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Sequence: [PDR BLAST] [ProtParam] |
1 11 21 31 41 51 | | | | | | 1 MVLTTPLAEA ACRKSGLSVV DMLSPFSLFK KIDVPVRTAS DQPYRLQMFK IRMVYASDVR 60 61 KQDYEVADQR IKPVVSEANE SALPDLLSDP PQLEDVLSKP EAELCPLWIK KFNRALMRTL 120 121 SFSEHETFDH PVACLLVVSS KDNEPISKFV DLFNTNQLPS LLNEGIMDPQ ILKHYLILHD 180 181 QQDGPQEIAM NILAEMKSTL GLNDCKLLCI NSSTEADGAD AENSWLPYKS HGLHNQDGAC 240 241 WLNTDDLNEI KDFMQDLASN HIIPYMEQKI RVLNQQVATT RKGFRNQIKN LWWRKRDDVP 300 301 EAANGPMYTF TSIESQIRVL GDYAFMLRDY ELALSNYRLL STDYKLDKAW KRFAGVQEMS 360 361 GLCYFMLDQS RKDAEYCLDS AFSTYLRIGS SGKRNATRCG IWWAEMLKTR GQYREASSVY 420 421 YRVSNEEPSL HSAVLLEQAA CCYVLSKPPM LRKYGFHLVL AGNSYYISDQ KQHAVRAYRN 480 481 ALFVYKQHPW SYINDHVHFN VGRWYGVLGI FDVAIKHLLE VIACSHQSLT TQSMFLNDFF 540 541 HFVQSMGKKF DVYKLQLPVI NMPSLRVIYE DHRTYASDAD VNVSESIWQE LEEEMIPSSS 600 601 IVRTNWLEKS PDLRKYKDSC VCVVGEAVKV RIELRNPLQI PVVVSCISLI CQLSTSLDAS 660 661 SAVNSVLTTG AGEDIANTKP AISTFEDDGN NFTVSKLDIV LGGSETKSVQ LEVTPKVEGI 720 721 LKLHGIRWTL SDLLVGYQYF EFDTKRKTKK GKKGPRRTLS NTLIVIKGLP KLTGCIDHLP 780 781 TNAFAGDLRL LKLNLRNQSE YAVKNIKMKL SHPRFVIPGD LSEVDFEFPQ CLRKHVQSEI 840 841 STVSTKRTQG DAKGLLFTFS QDIKIQEGAT FSWPIWFHAA TPGNFSLYIS LYYEMESPSE 900 901 ITYRTLRMHY NIEVFPSLNV SFAIRMCSSR LKEYIVRMDI LNRTPSESFI LHQLSCNDSK 960 961 WAISSLPLCD SIRSIETVSA NQSVSCFFKI KDLGTNSCKE AENSSCRSDM LFLSREGNSN1020 1021 TEEFDVSQSP ITNFHYQERY QQGRLAKGPR DLLDFILISK AVGGNYSKSD PDVQLLSHHV1080 1081 CHCSAIDQSP IWWFMEGPRT VTHDFSKSYC EANIQLVIHN TVQHNISARV VTYDSVPDKS1140 1141 QTVNLQDSNS NQGGWYDVSL ENDIKAISTA KGTHYQKQPS ESISPFVWCS LSSAQVDLKP1200 1201 DTSTKVPLKV CIFMPGTYNL SNYQLQWKVH SSEVGQVDEN QRSGGGQGHP FYVTVLQDA |
NOT SHOWING SINGLE HITS. [ Show Single Hits ]
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Domains predicted:
# | Region(s) | Method | Confidence | Match Description | |
1 | View Details | [1..165] | 1.07798 | View MSA. No confident structure predictions are available. | |
2 | View Details | [166..303] | N/A | No confident structure predictions are available. | |
3 | View Details | [304..619] | 5.522879 | The superhelical TPR domain of O-linked GlcNAc transferase reveals structural similarities to importin alpha. | |
4 | View Details | [620..695] | N/A | No confident structure predictions are available. | |
5 | View Details | [696..866] | 2.133987 | View MSA. No confident structure predictions are available. | |
6 | View Details | [867..1034] | N/A | No confident structure predictions are available. | |
7 | View Details | [1035..1259] | 1.078981 | View MSA. No confident structure predictions are available. |
Protein predicted to be: | GLOBULAR (No transmembrane regions or signal peptide) |
Confidence of classification: | 0.98 |
Source: Reynolds et al. (2008)