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Protein Overview: Y3514_ARATH

General Information:
Name(s) found: Y3514_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|75331425|sp|Q8W566.1|Y3514_ARATH RecName: Full=Uncharacterized exonuclease domain-containing protein At3g15140 [NCBI NR]
  • gi|19310525|gb|AAL84996.1| AT3g15140/F4B12_5 [Arabidopsis thaliana] [NCBI NR]
  • gi|18400647|ref|NP_566502.1| exonuclease family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|16930517|gb|AAL31944.1|AF419612_1 AT3g15140/F4B12_5 [Arabidopsis thaliana] [NCBI NR]
  • Uncharacterized exonuclease domain-containing protein At3g15140 OS=Arabidopsis thaliana GN=At3g15140 PE=2 SV=1 [Swiss-Prot]
  • AT3g15140/F4B12_5 [Arabidopsis thaliana]gi|16930517|gb|AAL31944.1| AT3g15140/F4B12_5 [Arabidopsis thaliana]gi|18400647|ref|NP_566502.1| exonuclease family protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Exonuclease family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | exonuclease family protein | chr3:5099719-5101724 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • AT3g15140/F4B12_5 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • exonuclease [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Polynucleotidyl transferase, ribonuclease H-like superfamily protein | chr3:5099712-5101717 REVERSE LENGTH=337 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 337 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IEA]
    intracellular [ISS]
    Biological Process: NONE FOUND
    Molecular Function: exonuclease activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASAFSAFRV SLSRISPFRD TRFSYPATLA LAHTKRIMCN SSHSVSPSPS PSDFSSSSSS  60
   61 SSSSPSTFSL METSENARWR PMCLYYTHGK CTKMDDPAHL EIFNHDCSKE LRVAAADLER 120
  121 KKSQEFNFFL VIDLEGKVEI LEFPILIVDA KTMEVVDLFH RFVRPTKMSE QAINKYIEGK 180
  181 YGELGVDRVW HDTAIPFKQV VEEFEVWLAE HDLWDKDTDW GLNDAAFVTC GNWDIKTKIP 240
  241 EQCVVSNINL PPYFMEWINL KDVYLNFYGR EARGMVSMMR QCGIKLMGSH HLGIDDTKNI 300
  301 TRVVQRMLSE GAVLKLTARR SKSNMRNVEF LFKNRIK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..123] FFAS03 0.969 Ribonuclease domain of colicin E3
    2 View Details [124..337] PSI-BLAST 34.0 No description for 1zbuA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.88

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle