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Protein Overview: HLDE_SALSV

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

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[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..319] PSI-BLAST 45.30103 Crystal structure of Ribokinase (TM0960) from Thermotoga maritima at 2.15 A resolution
2 View Details [320..477] PSI-BLAST 27.522879 CTP:glycerol-3-phosphate cytidylyltransferase

Functions predicted (by domain):

# Gene Ontology predictions
1
Term Confidence Notes
  • ribokinase activity
  • 4.25786236481087 bayes_pls_golite062009
  • catalytic activity
  • 2.11518580948187 bayes_pls_golite062009
  • carbohydrate kinase activity
  • 1.99025603598964 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
  • 1.69918601153494 bayes_pls_golite062009
  • transferase activity
  • 1.65599843675995 bayes_pls_golite062009
  • kinase activity
  • 1.6060752218324 bayes_pls_golite062009
  • phosphotransferase activity, alcohol group as acceptor
  • 0.143446029424335 bayes_pls_golite062009
  • phosphofructokinase activity
  • 0.0784945911925501 bayes_pls_golite062009
    2
    Term Confidence Notes
  • catalytic activity
  • 2.74718220535323 bayes_pls_golite062009
  • ligase activity, forming carbon-oxygen bonds
  • 2.19141941108903 bayes_pls_golite062009
  • ligase activity, forming aminoacyl-tRNA and related compounds
  • 2.19141941108903 bayes_pls_golite062009
  • aminoacyl-tRNA ligase activity
  • 2.17852738923841 bayes_pls_golite062009
  • ligase activity
  • 1.15322915814026 bayes_pls_golite062009




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle