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Protein Overview: gi|200388020, gi...

General Information:
Name(s) found: gi|200388020 [NCBI NR]
gi|199605118 [NCBI NR]
Description(s) found:
Found 2 descriptions.
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  • gi|200388020|ref|ZP_03214632.1| S-adenosylmethionine decarboxylase proenzyme [Salmonella enterica subsp. enterica serovar Virchow str. SL491] [NCBI NR]
  • gi|199605118|gb|EDZ03663.1| S-adenosylmethionine decarboxylase proenzyme [Salmonella enterica subsp. enterica serovar Virchow str. SL491] [NCBI NR]
    • Organism: Salmonella enterica subsp. enterica serovar Virchow str. SL491
    Length: 264 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKLKLHGFN NLTKSLSFCI YDICYAKTAE ERDGYIAYID ELYNANRLTE ILSETCSIIG  60
   61 ANILNIARQD YEPQGASVTI LVSEEPIDPK LIDQTEHPGP LPETVVAHLD KSHICVHTYP 120
  121 ESHPEGGLCT FRADIEVSTC GVISPLKALN YLIHQLESDI VTIDYRVRGF TRDVNGMKHF 180
  181 IDHEINSIQN FMSEDMKSLY DMVDVNVYQE NIFHTKMLLK EFDLKHYMFH TKPEDLTETE 240
  241 RQQITAALWK EMREIYYGRN ISAV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..169] PSI-BLAST 27.0 Crystal structure of S-adenosylmethionine decarboxylase proenzyme (TM0655) from THERMOTOGA MARITIMA at 1.2 A resolution
    2 View Details [170..264] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • adenosylmethionine decarboxylase activity
    		•  6.84247797666468 bayes_pls_golite062009
  • carbon-carbon lyase activity
    		•  3.32152822935886 bayes_pls_golite062009
  • carboxy-lyase activity
    		•  2.72149419399869 bayes_pls_golite062009
  • catalytic activity
    		•  1.62887824627302 bayes_pls_golite062009
  • lyase activity
    		•  1.49916840552571 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.89

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle