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Protein Overview: gi|224155855, gi...

General Information:
Name(s) found: gi|224155855 [NCBI NR]
gi|222869493 [NCBI NR]
Description(s) found:
Found 2 descriptions.
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  • gi|224155855|ref|XP_002337643.1| predicted protein [Populus trichocarpa] [NCBI NR]
  • gi|222869493|gb|EEF06624.1| predicted protein [Populus trichocarpa] [NCBI NR]
    • Organism: Populus trichocarpa
    Length: 220 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTEQKALVKR ITNETKIQIA ISLKGGPLAI EHSIFPEKEA EAVAEQATQS QVINVHTGIG  60
   61 FLDHMIHALA KHSGWSLIVE CIGDLHIDDH HTTEDCGIAL GQAFKEALGA VRGVKRFGSG 120
  121 FAPLDEALSR AVVDLSNRPY AVVELGLQRE KVGDLSCEMI PHFLESFAEA SRITLHVDCL 180
  181 RGKNDHHRSE SAFKALAVAI REATSPNGTN DVPSTKGVLM

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..220] Pfam 109.508638 Imidazoleglycerol-phosphate dehydratase No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • imidazoleglycerol-phosphate dehydratase activity
    		•  1.6337728630325 bayes_pls_golite062009
  • catalytic activity
    		•  0.878454819018611 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.369771518688522 bayes_pls_golite062009
  • structural constituent of ribosome
    		•  0.325699575011026 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.212099606954236 bayes_pls_golite062009
  • structural molecule activity
    		•  2.19428886088058E-4 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle