YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|42565826

General Information:
Name(s) found: gi|42565826 [NCBI NR]
Description(s) found:
Found 7 descriptions.
SHOW ALL
  • gi|42565826|ref|NP_190703.2| aspartyl protease family protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 528 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDVARQVFVL LSVLVVCWGF ERCEATGKFG FEVHHIFSDS VKQSLGLGDL VPEQGSLEYF  60
   61 KVLAHRDRLI RGRGLASNND ETPITFDGGN LTVSVKLLGS LYYANVSVGT PPSSFLVALD 120
  121 TGSDLFWLPC NCGTTCIRDL EDIGVPQSVP LNLYTPNAST TSSSIRCSDK RCFGSKKCSS 180
  181 PSSICPYQIS YSNSTGTKGT LLQDVLHLAT EDENLTPVKA NVTLGCGQKQ TGLFQRNNSV 240
  241 NGVLGLGIKG YSVPSLLAKA NITANSFSMC FGRVIGNVGR ISFGDRGYTD QEETPFISVA 300
  301 PSTAYGVNIS GVSVAGDPVD IRLFAKFDTG SSFTHLREPA YGVLTKSFDE LVEDRRRPVD 360
  361 PELPFEFCYD LSPNATTIQF PLVEMTFIGG SKIILNNPFF TARTQEGNVM YCLGVLKSVG 420
  421 LKINVIGQNF VAGYRIVFDR ERMILGWKQS LCFEDESLES TTPPPPEVEA PAPSVSAPPP 480
  481 RSLPPTVSAT PPPINPRNST GNPGTGGAAN LIPLASQLLL LLPLLAFL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..467] PSI-BLAST 47.0 Plasmepsin II complexed with a highly active achiral inhibitor
    2 View Details [468..528] PSI-BLAST 55.30103 (Pro)phytepsin; Plant acid proteinase, phytepsin


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle