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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|157509
Protein type: Transmembrane
Type Confidence: 0.85
Topology Confidence: 0.57
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLCPVVIYA FIIIIGFLEG IIALGGDDRN EITVGAIFYE NEKEIELSFD QAFREVNNMK  60
   61 FSELRFVTIK RYMPTNDSFL LQQITCELIS NGVAAIFGPS SKAASDIVAQ IANATGIPHI 120
  121 EYDLKLEATR QEQLNHQMSI NVAPSLSVLS RAYFEIIKSN YEWRTFTLIY ETPEGLARLQ 180
  181 DLMNIQALNS DYVKLRNLAD YADDYRILWK ETDETFHEQR IILDCEPKTL KELLKVSIDF 240
  241 KLQGPFRNWF LTHLDTHNSG LRDIYNEDFK ANITSVRLKV VDANPFERKK TRLTKVDQIL 300
  301 GNQTMLPILI YDAVVLFASS ARNVIRAMQP FHPPNRHCGS SSPWMLGAFI VNEMKTISED 360
  361 DVEPHFKTEN MKLDEYGQRI HFNLEIYKPT VNEPMMVWTP DNGIKKRLLN LELESAGTTQ 420
  421 DFSEQRKVYT VVTHYEEPYF MMKEDHENFR GREKYEGYAW ISLASFPSSW SSITEFMIVN 480
  481 GNGKYNPETK QWDGIIRKLI DHHAQIGVCD LTITQMRRSV VDFTVPFMQL GISILHYKSP 540
  541 PEPKNQFAFL EPFAVEVWIY MIFAQLIMTL AFVFIARLSY REWLPPNPAI QDPDELENIW 600
  601 NVNNSTWLMV GSIMQQGCDI LPRGPHMRIL TSMWWFFALM MLSTYTANLA FLTSNKWQSS 660
  661 IKSPQDLIEQ DKVHFGSMRG GSTSLFFSES NDTDYQRAWN QMKDFNPSAF TSTNKEGVAR 720
  721 VRKEKGGYAF LMETTSLTYN IERNCDLTQI GEQIGEKHYG LAVPLGSDYR TNLSVSILQL 780
  781 SERGELQKMK NKWWKNHNVT CDSYHEVDGD ELSIIELGGV FLVLAGGVLI GVILGIFEFL 840
  841 WNVQNVAVEE RVTPWQAFKA ELIFALKFWV RKKPMRISSS SDKSSSRRSS GSRRSSKEKS 900
  901 RSKTVS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle