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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|20387087, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSPCCLLALL AVISLTLAAS PGVKVKLTDK GIEYGKQIGM ASLQQKLKTM KVPDLSGTEK  60
   61 VPPIGKVKYS LTGMTIVNLG LPKSALVLMP GTGVRLAITN AFINLHGNWR VRYFRFIQDR 120
  121 GSFDLAVNGL TITADIAIKS DETGRPTVST VNCVANVGSA SIKFHGGASW LYNLFKSYID 180
  181 KALRSALQKQ ICPLVADVIT DMNPHLKTFN VLAKVDQYAE IEYSMVTSPT ISKSSIEFSL 240
  241 KGEFYNIGKH QEPPFSPTPF SLPPQDNNML YIGVSSFTPN SAGFVYNNAG ALSLYVTDDM 300
  301 IPPSSPIRLN TGTFGVFIPE IAKRFPGMMM KLLVKTVKEP TISLEPNNVT VQASGTVTAY 360
  361 AIQPNTTLSP LFVLNMEGSV SAQMNVTGVK LAGAITLNKI EMTLGTSYVG QFQVQSLDNI 420
  421 FLMVLKVVVI PKVNARLEKG FPLPTIGKMN LINTQLQVLK DYMLIGTDVQ FTG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle