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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|8572742
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.81
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALQQQHQRH QQHQQHQQQQ QQQQQQQQQH IKWQQHATKR RRCRQHWIKH LQLLRLLAVI  60
   61 VLASAPVPSH AQQQKFRTTP HDLQVLEGAE AMMRCEVANV AGAVQWTKDG FALGFSAVIP 120
  121 GFPRYSVLGD RKQGIYNLRI SNASINDDAD YQCQVGPARL NSAIRANAKL TVISPPASIE 180
  181 IKGYSHNSKV EVRENQDLQL KCIVANAKPA AQIVWYRGNV EYKPEKREDT VEESTAKRFT 240
  241 TTSSLKLKPG PDDDYTEYTC QARHKALSPD MPMRATVQLS VLYPPGPPYI EGYSAGETLR 300
  301 RGQTVELMCR SRGGNPPAQL IWYKNGSQIR MAYRTSGRLS ENIYTFTAEA GDNKARFRCE 360
  361 ASNVMSQNPL KAEVELSVLF APTHVTVMGP TEARVGDIVP LTCTTAPSNP PAEIKWMVGG 420
  421 RQVRNATSKT IVSPEGGWTT TSNITAVVEP NKRSLVVICH GLNMQLTENV VSTHTINVLY 480
  481 PPAPPLISGY MEGQIIPAGS VQKLLCVSSG GNPLATLTWY KNDKRINSVI RAADKSVSAE 540
  541 ITILANVSDN QAQYRCEASN SATEIPLFQS TTLSVHFAPE TVKIRIEPEE LRPGMEATII 600
  601 CDSSSSNPPA KLSWWKDGIP IEGINNTSKP GLWGGTVSTL EFRVNVTQEM NGQVYTCQSA 660
  661 NEALQRSAHE AVSLDVLYRP KFVPPPSSTA VGVEGESLQV SLQTRANPTP VTYKWTKDGT 720
  721 TIPQDGDHRI FADGGSLNFT RLHRDDAGIY SCSASNSQGG ATLNITVVVE YGTTIKSVSE 780
  781 NIVVNPGEDA MLSCTVEGKP LTEEHVKWER VGYDMTVKTS TTFANGTSYL HIKDAKREDV 840
  841 GNFRCVADNR VDNPTNRDIL LIVKCAPEIA KAPTLLRAAS GTGERGRLPC RAQGSPKPQF 900
  901 IWRQDKKDLP INRTYKYEVE ERKIDSLTYE STLIVDKVAP ADYGAYECVA RNELGEAVET 960
  961 VRLEITSQPD PPLSLNILNV THDTVTLAWT PGFDGGLKAS YRVRYRMADR EQYKYIDGLP1020
 1021 NSHKLTIGGL RMNTLYLFSV MSWNELGQSS YLPDLARAET KGLELMPAEL TEDSSNTPNL1080
 1081 VIIGISLAAF GFLLVNASLV AWFFVHQRRK KVAETTNQPA KTATIEMYAP SSYNDTVTGE1140
 1141 TLSSVSEKSE SYSNEGSSQP EYIDEARKKA ASTYLVEGSD MPPPRYQKDG TLPVNYPNNV1200
 1201 VNACTLPHPR HNNGSAAIHM TRDDQMLISK GVYIPSPSPA PPPDGSYYNM NSDRYLSYPP1260
 1261 MEYPAALDFT AQPMPMAHLQ PMTVTSLATN GGPTLIGNGS VAAVAGGSGT LRRGILRGVV1320
 1321 GVPQPDVTHH TSTVGGSPMQ MLHDLHPVNL SASTLTTSTT LNGSLPTATA TLPRQPHGIL1380
 1381 KDPNRNKQQQ QQQQQQQQQQ QQLQHQQQLL NASLVGVGVP VSAPLGSLQI LNLPPASGGL1440
 1441 GNNLLMTTNA FDPTTVGLSS FGAVSQAGGI PVAYTDADGH LV

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