YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|50344814, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.77
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSASPPISAG DYLSAPEPDA LKPAGPTPSQ SRFQVDLVTE SAGDGETTVG FDSSPPEYVA  60
   61 EPPPDGLRDS VSGGEKAKGR FRVVNFAASS PDAAPAETAQ NGDTVMSEGS LHSSTGGQQH 120
  121 HHYDTHTNTY YLRTFGHNTI DAVPKIDFYR QTAAPLGEKL IRPTLSELHD ELDKEPFEDG 180
  181 FANGEELTPA EESAAKDVSE SKGVVKFGWI KGVLVRCMLN IWGVMLFIRM TWIVGQAGIA 240
  241 YSCIIVIMAT VVTTITGCST SAIATNGFVR GGGAYYLISR SLGPEFGGSI GLIFAFANAV 300
  301 AVAMYVVGFA ETVVELLMDS GLLMIDQTND IRVIGTITVI LLLGISVAGM EWEAKAQIFL 360
  361 LVILITAIFN YFIGSFIAVD SKKKFGFFSY DAGILAENFG PDFRGQTFFS VFSIFFPAAT 420
  421 GILAGANISG DLADPQMAIP KGTLLAILIT GLVYVGVAIS AGACIVRDAT GIESNFTLIS 480
  481 NCTDAACKYG YDFSSCRPTV EGEVSSCKFG LHNDFQVMSV VSGFSPLISA GIFSATLSSA 540
  541 LASLVSAPKV FQALCKDNIY PGIAIFGKGY GKNNEPLRGY FLTFGIALAF ILIAELNVIA 600
  601 PIISNFFLAS YALINFSVFH ASLANSPGWR PSFKYYNMWA SLAGAILCCV VMFIINWWAA 660
  661 LLTNVIVLSL YIYVSYKKPD VNWGSSTQAL TYHQALTHSL QLCGVADHIK TFRPQCLVMT 720
  721 GAPNSRPAIL HLVHAFTKNV GLMLCGHVRI SSRRPNFKEL NSDMLRYQRW LLNNNSKAFY 780
  781 TCVVAEDLRQ GTQYMLQAAG LGRLRPNTLV IGFKNDWRIG DIKEVETYIN LIHDAFDFQY 840
  841 GVVILRLREG LDISHIQGQD DSSGMKDVVV SVDISKDSDG DSSKPSSKAT SVQNSPAVQK 900
  901 DEDDDGKAHT QPLLKKDKKS PTVPLNVADQ RLLDASQQFQ QKQGKGTVDV WWLFDDGGLT 960
  961 LLIPYLIANK KKWKDCKIRV FIGGKINRID HDRRAMATLL SKFRIDFSDI TVLGDINTKP1020
 1021 KSEGLTEFAE MIEPYKLRED DMEQEAAEKL KSEEPWRITD NELELYKAKG NRQIRLNELL1080
 1081 KEHSSTANLI VMSMPLARKG AVSSALYMAW LDTLSKDLPP ILLVRGNHQS VLTFYS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle