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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|33327154, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWQSFVLLLT GLLGLCSCSS FPSNINIGGL FPTDSHEYDV FRFALSQHND VPKLVPQVDM  60
   61 VDTGSSFAMT YAFCSQFSKG VYAIIGLYDR KTMNMLMSFC GALHVCFVTP SFPIDTNNQF 120
  121 VIQLRPELQD ALIALVEHYK WNKFVYMYSS DSGLTVLQKI LDTAAEKTWQ VTSINFDTLT 180
  181 EAAFLKAIQD LDNKKEFKII LDCELERLNS ILNLIAAQKK NLKNYHYILA NLGFLDLNLT 240
  241 EFRKGGANVT GFQLMNYTNP TVSRTIQDWL EFDSKDLKSP KRRLKYTGAL TYDGVTVMAT 300
  301 AFQNLRKQRI DISRRGNAGE CLANPPAPWG QGIDIQRALQ QVQFEGLTGH VQFNDKGHRT 360
  361 NFTVSVMEFG PSGPKKVGYW NQREKYVSTA TYSNMLNETF GLQNRTYVVT TILEAPYVML 420
  421 KKNHEQLVGN DKYEGYCVEL AAEIAKHVGY SYRLELVGDG KYGARDAETM MWNGMVGELV 480
  481 YGKADVAVAP LTITLVREEV IDFSKPFMSL GISIMIKKPT KSKPGVFSFL DPLAYEIWMC 540
  541 IVFAYIGVSV VLFLVSRFSP YEWHADDEEE TADQQNQNQP PSPEPNQSPN QSQNQREEKQ 600
  601 EKQPEHTNEF GIFNSLWFSL GAFMQQGCDI SPRSLSGRIV GGVWWFFTLI IISSYTANLA 660
  661 AFLTVERMVS PIESAEDLAK QTEIAYGTLD GGSTKEFFRR SKIAVFEKMW SYMKSAEPTV 720
  721 FVKTTDEGVV RVRKSKGKYA YLLESTMNEY IEQRKPCDTM KVGGNLDSKG YGVATPKGSA 780
  781 LRNPVNLAVL KLNEQGLLDK LKNKWWYDKG ECGSGGGDSK DKTSALSLSN VAGVFYILIG 840
  841 GLGLAMLVAL VEFCYKSRIE SRRMKQIIDA AMLSSTLTRM GSGGENGRVM AHDFPKGAQT 900
  901 LPCMGQAAAM GLSTTGM

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle