YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|41053742, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.59
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALKTALSRL LVNSQRCPLM CVSRAQGTLA PAAYDKEERI KKTSKQPKVT FDWRDALDLE  60
   61 GQLTEEEIMI RDSFRTYCED KLMPRIIMAN RNEHFHREIL NEMGELGVLG PTIQGYGCAG 120
  121 TSYVAYGLIA REVERVDSGY RSVMSVQSSL VMHPINAYGT EEQKQKYLPK LARGEILGCF 180
  181 GLTEPNHGSD PAGMETKAKY NPSSRTYSIS GTKTWITNSP YADICVVWAK CEDGKVRGFV 240
  241 LERGMKGLST PKIEGKFSLR ASATGMIVMD EVEVPEENLL PHVSGLAGPF GCLNNARFGI 300
  301 AWGALGAAEF CFHAARQYTM DRIQFGVPLA RNQLIQKKMA DMLTEITIGL QSCLQLGRLI 360
  361 DQKKHTPEMI SLLKRNSCGK ALDIARQARD MLGGNGIADE YHIIRHVMNL EAVNTYEGTH 420
  421 DIHALILGRA ITGLQSFTVG K

Type	Start	End	Confidence
Signal Peptide	1	27	0.59
N-region	1	18
H-region	19	24
C-region	25	27
Cleavage Site	27	28
Non-Cytoplasmic	28	441	0.98