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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|47086359, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.73
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPVRRGHVAL QNTYLDTIIR KFDGQNRKFL IANAQMKNCG IIYCNEGFCQ MFGFSRAEIM  60
   61 QQSCTCQFLV GPGTMKSALG QLAQALLGSE ERKVEILYYS KEGTCRPCLI DVIPVKNEEG 120
  121 VVIMFILNFQ ELLDPSMKKG GLKQRMANSW LRAGQRRRMH LRMPSLRVKR QPSLPKDHFE 180
  181 GVVVDYLQPS HEEVALKDLQ MSPDSCLKSE TQALIQQTPS SCELSPPPSR PSDRLEPSGP 240
  241 LLKHSHSRES MHSLRRASSL HDIDGMRDQW SDLKPSNLNS TSDSDLMRHR TIGRIPQVTI 300
  301 SFGSDRLRPP SPTEIEIIAP SKIKDRSQNV SEKVTQVTQV LSLGADVLPE YKLQAPRIHK 360
  361 WTILHYSPFK AVWDWIILLL VLYTAVFTPY SAAFLLNEQE DERRRTCGYT CNPLNVVDLV 420
  421 VDVMFIIDIL INFRTTYVNH NDEVVSNPAR IAQHYFKGWF LIDIVAAIPF DLLIFRSGSD 480
  481 EPQTTTLIGL LKTARLLRLV RVARKLDRYS EYGAAVLFLL MCTFALIAHW LACIWYAIGN 540
  541 MERTSSARIG GMKIGWLDNL ADQIGKQYND SNSFSGPSIK DKYVTALYFT FSSLTSVGFG 600
  601 NVSPNTNPEK IFSICVMLIG SLMYASIFGN VSAIIQRLYS GTARYHTQML RVKEFIRFHQ 660
  661 IPGGLRQRLE EYFQHAWPYT NGIDMNAVLK GFPECLQADI CLHLNRSLLQ SCKAFRGASK 720
  721 GCLRALAMRF RTTHAPPGDT LVHSGDVLTA LYFISRGSIE ILRDDVVVAI LGKNDIFGEP 780
  781 ISLYARPGKS SADVRALTYC DLHKILRDDL LEVLDMYPDF SDNFWSNLEI TFNLRDVDRI 840
  841 MHPTPSEDSD CGYRRPRHRR NPLRRNRPDG MDRDGMDTYP VQPCSPVGNH RGAIPLSQWD 900
  901 ELCSDGSPAS LSSEEDMKPL VSGQGDMYSL GTEMQEFSPS AVSLMPSAHS TASAMAGPLT 960
  961 GAHQYTAAPL NISGVYSYLS DRRASEYSES QRRSSAVQAC YHHHSPCVGD RPNQLQARLE1020
 1021 LLQSQLNRLE TRMTADINVI LQLLQRQMAP VPPAYSAVSP DPLAHPVPPA HPTSLYTTAA1080
 1081 HNTTPSLQIT DASSPGKSPD VDSLKEKSPD SLSSGIHLTV ASTDTMSMSP ETELSVPSAG1140
 1141 PLLQPPGLLC SSLRFPSLPD SLEGPGTLEG SPEIQRHVSD PVLPGS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle