YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|44662805, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLLFAATFA LFVLSAFDQA DSSAYDKIVA HSRIRAKKQG PNMCALQQVV GTKKKYFSTC  60
   61 RNWYQGAICG KTATVLYECC PGYMELAGQR GCPAVAPIDN VFGTLGLVKA KTTQDYSDIS 120
  121 KLRQEIEGAG SYTFFAPSND AWDLLEAEVR NALVSNVNIE LYNALHYHMV NKRLLTKDLK 180
  181 NGMTATSMYN DLSLHINHYS NGVVTVNCAR IIHGNQVATN GVVHVIDRVI TAVGSTIQDM 240
  241 IEVEDDLSTL STVATDSGLI DKLGEPGHFT LFAPTNAAFD KLGREVLDRL MKDKKSLQAL 300
  301 LNYHLLNSVQ CSEAIMAGTS HETLEGSNIE IGCDGDSLTV NGIKMVLKKD IVATNGVIHL 360
  361 IDEVLMPDSA KQVMELVGQS QATFSDMLTE LGLSAAMRPQ AEYTLLAPVN AAFNDEVMSM 420
  421 DQSFLKIILE NHILKNKIVL SQLYNGQRLE TLSGKFLRVF VYRTALCIEN ACLIRGSKEG 480
  481 SNGALHLMKT LISPAESSMF QILVKNGAFK IFLSLMEAAG LTDLLKQEGD FTLFAPTDEA 540
  541 FAGLSERDLT LLKSNGNALK AILLYHFSNG VFIGGGLETG VTNLLKTLQG SNLRVLYANA 600
  601 SMLVNTVKVP EPDIMATNGV VHFVRTLLYP EDIPVGSQDL LSLLRRIIRY IQFKFVPGYR 660
  661 YQEIPLTFMR RVITVPGDVT KVTRVIQGEP TITKVTRVIE GAPSVTKVTR VIEGQPSITK 720
  721 VTRVIEGQPS LTKVTRVIEG DPSMTRVIED FGEDSEGITT FIQEGTRRVP PRRVQGGVRR 780
  781 RT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle