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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CXA1_DANRE
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGDWSALGRL LDKVQAYSTA GGKVWLSVLF IFRILVLGTA VESAWGDEQS AFKCNTQQPG  60
   61 CENVCYDKSF PISHVRFWVL QIIFVSTPTL LYLAHVFYLM RKEEKLNRKE EELKAVQNDG 120
  121 GDVELHLKKI ELKKFKHGLE EHGKVKMKGS LLRTYIFSII FKSICEVVFL VIQWYLYGFS 180
  181 LSAVYTCERT PCPHRVDCFL SRPTEKTIFI IFMLVVSLFS LLLNIIELFY VLFKRIKDRV 240
  241 KSRQNTQFPT GTLSPTPKEL STTKYAYYNG CSSPTAPLSP MSPPGYKLAT GERTNSCRNY 300
  301 NKQANEQNWA NYSTEQNRLG QNGSTISNSH AQAFDYPDDT HEHKKLTPGH ELQPLALIDA 360
  361 RPCSRASSRM SSRARPDDLD V

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle