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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|41055552, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.56
Topology Confidence: 0.53
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMMMNVLSAL LLLFIHCQLC WSADFQLTLL HTNDVHARVE ETNKDSGKCS KPPCFAGVSR  60
   61 RSTKIKEIRS KEKNVLLLDA GDQFQGTVWF NYYKGAEAAY FMNQLKYDAM ALGNHEFDNG 120
  121 VDGLLKPFLQ EVNCTVLSAN IKADETLAPR ISGYYFPYKI FTLGSEKVGV VGYTSAETPA 180
  181 LSLPGPHLKF EDEITALQPQ VDKLLTLGVN KIIALGHSGF LMDQMIAKKV QGVDVVIGGH 240
  241 TNTFLYTGDP PSTEVPAGPY PLMVKSDDGR QVPVVQAYAF GKYLGFLKVT FDANGNVLES 300
  301 TGNPILLNSS VEPDPDIQAK VDSWRMNLAN YSSQQVGQTL VFLNGTFEEC RFRECNLGNL 360
  361 ICDAMVHHNI KYADELQWNH VSSCILNGGG IRGPIDERNR NGSITMEDLI AVLPFGGTFD 420
  421 LVQLNGSTLL EAFEHSVRRH GGNTGEFLQV SGFQVVYDLS KAPGSRVKSV KVLCTQCRVP 480
  481 HYEPLVPNKV YKVVLPSYLV DGGDGFTMIK EKKLKHDSGD LDISVVAGYI SERKRVHPAV 540
  541 EGRFQFSSSC AGLRGYTSTV LLLWAVWLML V

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle