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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|41054866, gi|...
Protein type: Transmembrane
Type Confidence: 0.66
Topology Confidence: 0.64
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MREMSATGNS TLGGQQPRKH YGITSSISLA FPREIDHIYT QKLTEAMKPF GVFEGEDELN  60
   61 HRLAVLGKLN SFVKEWISEI SESKNLPPSA VANVGGKIFT FGSYRLGVHT KGADIDALCV 120
  121 APRHVERTDF FSSFFEKLKR HDEIKDLRAV EDAFVPVIKF KFDGIEIDLL FARLALQSIP 180
  181 DNLDLRGDSL LRNLDIRCIR SLNGCRVTDE ILYLVPNKEN FRLTLRAIKL WAKRRGIYSN 240
  241 MLGFLGGVSW AMLVARTCQL YPNAVAATLV HKFFLVFSKW EWPNPVLLKQ PEDSNLNLPV 300
  301 WDPRVNPSDR YHLMPIITPA YPQQNSTYNV STSTRTIMNE EFKNGLTVTD EILQGKADWS 360
  361 KLFEPPNFFQ QYRHYIVLTA SASTEENHLE WIGLVESKIR VLVGNLERNE YITLAHVNPQ 420
  421 SFPGSKENRN ENDFVSMWFI GISFKKLDNS DCVNIDLTYD IQSFTDTVYR QASNINMLKD 480
  481 GMTIEATHVK KKQLHHYLPP ELVQRKKKSL GDINRSSNGG GSKRCSLDSS QLDSSRDTDI 540
  541 GTPFSSPTPI SKPCQPASTP EDNSSSPPQH PVLVFMDSPP ASELSQPKPE QGMSIPVIGS 600
  601 KPITTPVAKP PTPPAGNTIP TVVGRSVIPR LAASSPELAN SVNGAPKRPH SPSLEDPPKR 660
  661 HKDTEVFSDD SAFKEPYPPS SNGLDGDEGQ TVEALAETKA MPIPTIDTSR SQRLPSKELP 720
  721 DASSPIPTSN LRVIKNSIRL TLNR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle