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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|160773766, gi...
Protein type: Transmembrane
Type Confidence: 0.70
Topology Confidence: 0.63
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSREQLAVQQ ARKAFLTGRS KSLDYRIKQL KNLSRFIKER AADITNALRK DLYKSANSTQ  60
   61 LFEILGLEGE INLAVSKLAE WAAPRPVNKN LLTISDDVFL QPEPLGVVLI IGAWNYPIAV 120
  121 TLQPLVGAIA AGNAVVVKPS EVSSHTASVM ELMSLYLDSE MYQVVTGGVP ETQELLKQRF 180
  181 DHIFYTGNST VGKLVMEAAS HHLTPVTLEL GGKSPCYIDK NCDIRIACRR ITWGKYLNCG 240
  241 QTCIAPDYIL CESSIQDRVI DEIQKCIKEF YTIDPKTFED YGRIINRRHF KRIMALLEGS 300
  301 TVAIGGDCDE SECYIAPTVL RDVKPASKVM QEEIFGPILP IVTVNGLKEA IEFINDREKP 360
  361 LALYVFSSSK KVIKQMISET SSGALLANDC MVHFTLSDLP FGGVGYSGTG RYHGKYSFDQ 420
  421 VSHLRSCLIK KLNMEAVNQM RYPPHTTEKL RWARVLLLKQ INVTRWRQMA QVAVLAALAA 480
  481 FVVKRFLR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle