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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: L3BPB_DANRE
Protein type: Globular with Signal Peptide
Type Confidence: 0.88
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLLWPLLFL QVSALRRTLF DRPKQLMQEG RVRLVGVIPS SGRVEVYHDG QWGTVCDDGW  60
   61 DLAEAQVVCR QLGFPGAVSV ATGGQYGEGS GRVWLDDMNC KGSESLLSEC SFKGWGVSDC 120
  121 THKEDAGVIC APGKNTTSIR QMSVDNSLGL SDDLGLLFDS EDGCDFTIAV RDLSEEAELT 180
  181 FCVHRVILMI YPELNLTHDT RNITVDISQT CHTHVPRFLR YLYTRQIDVS TTSAQCLHQL 240
  241 AFIFGVQKLM EDVGRVFTAL IPEDNTFQTQ VSMYEYGVRT GDLVLQENVL QYLSWNCEFL 300
  301 ISSPVWSTVS FDMMDALLQR SDLIVKDEAV LLEALERWIQ DKGDQISSDK QVSLLNHIRF 360
  361 LLIPVDKLYD IQFSSSALRQ SNEKLYLTGL LRGFQFNALP FSKIRDQVVK LSGNYIPRIY 420
  421 IGDEWSLGLN VSTVNNPHYN PYQYGYDQRY GQSNRIEKYL STPAHPSAVY RGQMIQWQAQ 480
  481 VFRSVQDCRN SGISCNSVPL VRFLATSSQY SYSSTIRYNN RLVLTCKNQN NVFHVQDFKN 540
  541 NMAVIPTNSS MGLPNPCPDD YSFRFVVRPQ YI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle