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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|39645931, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSCLLLGVLK RRNAISTASV GVRSLASIPS LPPSVAEFVS GAAAECKPAK VHVVTGTPEE  60
   61 TADLLANLEK EGMVKKLAKY ENCWLARTDP KDVARVESKT VIVTKNQRDT IPIPSGGAKS 120
  121 QLGSWMSEQD FQKAREDRFP GCMAGRTMYV IPFSMGPVNS SLAKFGVQVT DSPYVVASMG 180
  181 IMTRMGTPVM EKLAQGAEFV RCQHSVGRPL PLKGPLVNSW PCNPEKVLIS HLPDTRQILS 240
  241 FGSGYGGNSL LGKKCFALRI ASRIAKDEGW LAEHMLILGI TNPQGVKRYI AAAFPSACGK 300
  301 TNLAMMKPSL PGWKVECVGD DIAWMKFDSQ GKLRAINPEN GFFGVAPGTS LKTNPHAMET 360
  361 ISRNTVFTNV GETSDGGVWW EGLEPPAPGI KLTDWHGKSW KYGDSTLCAH PNSRFCAPAG 420
  421 QCPIIDPLWE SDEGVPIDAI VFGGRRPEGV PLVYESFNWR HGVFVGAAMR SESTAAAEHK 480
  481 GKVIMHDPFA MRPFFGYNFG DYLSHWLSME TRKGPTQLPK IFHVNWFRKD QKTGSFLWPG 540
  541 FGENARVLEW IFKRCGRTSE NEAATKSIVG WIPQNGAINT EGLGGNIDMG ALFDLPKPFW 600
  601 QKETQELRTY FNQQVGADLP AQVEGELKAL EERVRD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle