YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|126540843, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.68
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSVLAASAP SPPPPGPGAP GLVSVPPGFT MPPVSPVSAP SSSPTGQQDT EPPLPNPGGF  60
   61 EECHRKCKEV FPVQMEGVRL TVNKGLSNHF QVNHTVLLST QADSSYRFGA TYVGTKQTGP 120
  121 GEAFPVMVGD MDNTGSLNAQ VIHQITDKVR SKFVFQTQQQ KFVNWQGDTE FKGEDFTAAV 180
  181 TFGNPDVLMG SGIVVAHYLQ SVTSSLALGG ELVYHRRPGE EGTVMSLAGR YTGSNFIATL 240
  241 TLGGAGVHAS YYHKANDQLQ VGVEYEVSTR MQDTSVTFGY QLDVPKANLV FKGSLDSNWV 300
  301 VGANLEKKLQ PLPLSLALSA YLDHRKHKFQ CGFGITIG

Type	Start	End	Confidence
Signal Peptide	1	18	0.69
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	338	0.97