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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|41054978, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTCVHLLLTL VFAVSLGTPV EVHRPRGVPL SKKPFYEENK PFTCLDGSKT ILFDQVNDDY  60
   61 CDCKGGSDEP GTAACPNGKF HCTNAGYKPT FIPSSRINDG ICDCCDTTDE YNSGAKCENT 120
  121 CKELGRKERE VLQKMAEITK EGFLLKQQLI EEAKKGRGEK QSKVTEMQDN KKQLEEKVEA 180
  181 LRTVKETAEQ PEREAKERHL KAWEEQKAAI RLVKDKAKMA EAFLELDDNA DGLVSVSELQ 240
  241 SHAELDSDTD GTLSEAEAKG LMGGVEQVDT ATFESVWENI KDKYHSESQP EEPAPVETPV 300
  301 DEVKEPVVDN ESEPYPEDIS EEEDEDDDDD DEYHEEDEKA PPTMKTPEKS QEDEEAMPPY 360
  361 EADTQVLIEA AQKARDDFEE AEKALREMDD QIRNIEKELS FDFGPNAEFT YLYSQCYELS 420
  421 TSEYIYRLCP FNRVSQKPKF GGSETNLGTW GSWSGPENNK YLSMKYEHGT GCWQGPNRST 480
  481 TVKLTCGKET MLTSTSEPSR CEYLMEFITP AVCQEPSNID LSAHGHTEL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle