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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: LAMB4_DANRE
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLRLELSAL LLLLIAAPVR LQDECVGNSC YPNLGDLMVG RAAQLAASST CGLYRPQNYC  60
   61 ILGYLENERK CFTCDSRSPY NDYHNPSSHR IENIITTFQP ERKMKWWQSE NGVHEVSIQL 120
  121 DLEAMFQFSH LILTFKSFRP ASMLVERSKD FGRTWKVFRY FAEDCANSFP GISEGPAHSI 180
  181 DDLVCDSRYS GAEPSTEGEV VLKALDPSFD IHDPYDSTIQ GLITLTNLRV NFTRLLTLGD 240
  241 TLLTRRKRNP QDKYYYALYE MVVRGSCFCN GHASQCIPVD GARGDTFTEP GMVHGRCVCQ 300
  301 HNTAGYNCER CQDFYHDAPW RPGGKADSDV CKRCNCHSHS EKCHFELARY LATGGVSGGV 360
  361 CDDCRNNRIG PQCELCGPFY YQDPQRSVDD PYACIPCDCD LDGSVDRGLC DPVNGQCVCK 420
  421 QNIEGERCDR CKVGFYGFSR DDPSGCQLCR CNFLGTIQVG NPCDPTTGRC ICEHFAYGSQ 480
  481 CDQCLPGYWG LGNTVYGCIP CDCDIGGALK TECSSVDGQC KCRPNMVGQK CNDPAPGYFL 540
  541 APLDFYIYEA ENAAPLAVIS PFIGPPPFVY PTEGIPERPT KLPLCPPAPK PSSVPYREHI 600
  601 TVQPSPAPHN PQVTLPMCEH YFRQRGYDFK ISNGRLVVVK REKRQTRRRR QGQRTIPFEP 660
  661 GSPLQILLRQ RANDQSITWT GLGFVRVQDG AGLRFTVSNI PATLDYYVVV RYEPESTDDW 720
  721 TAIVSILSIG SEDERCPNDQ SNKMFTLPAS GRTATLDLPV CLSDGNQYHV DITFRKQPSE 780
  781 DPHSSSFILI DSLGLIPKVE SVPNFCSQSY LSQFQQYRCI ELAVQAGGQT LPEVCEMLIG 840
  841 SMSAFIHNGA VSCNCHHVGA YGSSCSKFGG QCQCKPNVIG RCCDSCAPLT YGLGPNGCSP 900
  901 CDCDRSGSTT ELCDQTTGQC SCRDGITGLQ CNRCYPGYYG FPLCRRCQCN RLADICDPIT 960
  961 GDCLDCREHS AGRNCERCEE GYVGDPVSGQ PCEPCLCPDL NGSGRFFAFS CNKDPRSGAP1020
 1021 YCECLPGHTG PQCDSCSPGF YGDLRLPGGR CKECCCNNNI DPRDGDACDP VTGECLRCLH1080
 1081 NTEGPRCQSC KRGYYGNALA QDCKECSCDR RGTDDSKCPA GSPCFCDQDT GQCPCRPGVQ1140
 1141 GALCNECDDG YWNMDGDYGC QPCNCNREHA LNYICDKITG QCLCQPEYGG RICDECGPNH1200
 1201 FGNPDLQCMF CDCNLEGTVH PACDAYTGEC LCKPGVTGPF CDECAPGHNN NFPACEPCHA1260
 1261 CNHLWEKIIS DLSLDAERIE TMMPCPEDFR SRPELQHLQN LLEKLQNVLN MGAQDELKKL1320
 1321 EELLARIRNE TEIIDPNIII IDPTLLLNTD IDYIRLEFNK LLKNLREKAK EGPVTDIKAV1380
 1381 NDIFNKIKKF YDEFTDSEKK VEAAKKVQEA SRKTREKVTL ELAKCQIGEM DKLERKVKAL1440
 1441 SAANINEEVC GAPGDAECEK AKCGGALCGK CGGPDCTGSL PISLNASKLA EMTEKNITAL1500
 1501 RSQLKEADAQ LRNASEMTSY VKDQAENMMD KINRTKTKYE QEKTDTKALI EKVKTYLQDE1560
 1561 LVKPEDIEKL ANAVLSIQLP KSPDEIKDMI EDIKKILANI TEFNDDLEYL EKQAKIAGNM1620
 1621 KERAKEILNR TELINVKEIE KALNDTAKLH DKIFNDLDEA EQNNDVIREK VNETEPKLKN1680
 1681 IEDHLNLTRA KTLLDEIEAL KNKTEMNRAQ GKEAKDTADA ALNSANDTGK DLEELKEQFE1740
 1741 KLKLNSTNQN VSSEANERLK NITMEAENLA KHVEDKMKEI EDLEEKILLS NERKDEMRKE1800
 1801 LEALQKEADD LKKFIVDKVQ RYNLCSP

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