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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|21538979, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLQLAALSI LGAWALADVP ELGDVCTEGS CYPATGDLLI GRAQQLLATS TCGVHKPEPF  60
   61 CIVSHLQEEK KCFVCDSRQA YNETAHQVTS HSIENVVTTF APNRLKTWWQ SENGLENVTI 120
  121 QLDLEAEFHF THLIMTFKTF RPAAMVIERS ADFGNTWQVY RYFAYDCESS FPSVSHGPMT 180
  181 KVDDVICDTR YSDIEPSTEG EVIFRVLDPA FRIEDPYSPR IQNMLKITNL RVKFTKLHTL 240
  241 GDNLLDSRIE IKEKYYYAIY DMVVRGNCFC YGHASECAPV DGTGEAVEGM VHGHCMCNHN 300
  301 TIGLNCERCQ DFYHDLPWRP AEGRNTNACK KCHCNHHSHS CHFDMAVYRA SGNVSGGVCD 360
  361 DCQHNTMGHN CEQCKPFFHQ HPEKDIRDPN ICEPCNCDPV GSLNGGVCDP MTDVSLGLIS 420
  421 GQCRCKPNVE GERCDQCKQG HYGLSEDPLG CQPCTCNALG TVPGGSPCDT DSGNCYCKRL 480
  481 VTGRNCDQCL PQHWGLSNDM DGCRPCDCDH GGAINNNCSP VSGQCQCREH MFGRRCDQVE 540
  541 SGFYFIALDH YTYEAEEAKF GPGVTVVPRN HPQDRSPTWT GIGFVNVPEG AFLEFSIDNI 600
  601 PYSMEYDLII RYEPQLPEQW EEVLMTVIRP RVITADSRCA NTMPDDDNQM VSLHPGSRYV 660
  661 VLPRPVCFEE GLNYTVRLSL SLYSALSDVQ SPYTLIDSIV LMPHCKNLDI FSGSGTEGGN 720
  721 LVTNSAWENF QRYRCLENSQ AVVKTPMTDI CRNYIFSVSA LLHQGVKACQ CDPQGSLSTV 780
  781 CDPSGGQCQC RPNVVGRNCD RCAPATFLFX PQGCRPCDCS PEGSVHSYCH EATGQCECIA 840
  841 GAYGRQCDRC LPGYWGFPNC RPCTCNGHAE QCDPQTGQCL SCRDHTTGHN CERCLGGYYG 900
  901 DPVLGSGDHC RPCMCPDGPG SGRQFSGACY KSPDSSQVFC VCNQGYKGAR CEECAPGYYG 960
  961 NPHEVGGECR PCQCNSNIDM MDPESCDART GACVKCLYHT EGESCNRCRL GYYGNALTQS1020
 1021 CRKCVCNQMG TVEEMCPSPG NCNCDLTSGQ CLCLPNVVGQ HCDQCAPDTW NMASGKGCED1080
 1081 CDCDPNHSFG SSCNEIMGQC SCKPGFGGRT CRECRELFWG NPEVKCHACD CDPRGIAEQQ1140
 1141 CNKVTGHCVC VEGVSGPRCD TCARGYTGEF PQCERCHQCF AEWDIIVGDL TNQTHRLVQK1200
 1201 VNTIKATGIT GPYQATINNV ENSANSIRNI LAQNPATQPL TEIQGLLEQA TALMAEMNSN1260
 1261 LNLTEETLSE ISSDNNSTDT KLKSLKEEAQ KLEQTVKDLR EQVEFVKNSD IRGARASVTR1320
 1321 YYEQSQNAEI RANASTTDPY NLVNQSATLR TETEELMNQT KEEFNQRQDE FSKKLDNLAG1380
 1381 QLETLDLSEL SEKTCGSPAG SENCADSRCG GLSCVDMQGS RKCGGEGCDG LTTLAHNAWQ1440
 1441 KAKDFDLEII SAMEEVDKLS KMVSEAKVKA DEAKLNAQEV LAKTNETKKR VDSSNEELRQ1500
 1501 LIKQIRDFLT QDGADLESIE AVANEVLQMQ MPTTPAQLQN LTEEIRERVG SLTDVEDILN1560
 1561 QSAADILRAE SLLEQARKAR KEASDVKSTA EMVKEALQHA ERAQNSVAEA LKQAAVDIKG1620
 1621 TQDLLVSVES ETSDSELKLS NATRRLLKLE SDVALLKEKA LNTSISANST EKEAESINAL1680
 1681 AEQLKKDLDS ELKDKYSTVE ELITQKAEGV AEAKKRAEKL QEEARNLLLQ ASEKLQLLKN1740
 1741 LEKNYDQNQK LLEDKANELV DLEKAVKELL QEISHKVTVY STCLF

YRC Informatics Platform - Version 3.0
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