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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|34783766, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.79
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLQLKWVFSV MWLFSRLTVC KTYVVRRSGK AASPDESLSK SFSDQPFTSL AGSCKKRCFE  60
   61 LVEADPPNCR CDNLCKTYNM CCSDFDDHCL KTAGGFECSK ERCGENRNEQ HACHCSEDCM 120
  121 AKGDCCTNYR SLCKGDVPWL QEECEEIKNH ECPAGFVRPP VIMLSVDGFR ASYMKRGGTV 180
  181 IPNIEKLRSC GTHAPYMRPM YPTKTYPNLY TITTGLYPES HGIVGNSIHD PSFDANFNFR 240
  241 GKEKLNHRWW GGQPIWITAM KQGVKAGSFF WPVAIPMERR VLTMLQWLHL PDAERPYLYA 300
  301 MHSEQLDSYG HKLGPHSTEL NSALRDVDKV IGQLMNGLKQ MKLHRCINII LVGDHGMEEA 360
  361 HCDKTEFLSS YMSNTEDLIL IPGSLGRIRA RNPNNSKFDA KAVVANLTCK KPDQHFKPYL 420
  421 KQHLPKRLHY ANNDRIEEIH LMVERKWHIA RKIMKTKRNH EKCGFAGDHG YDNKINSMQT 480
  481 IFLGYGPAFK FKTKIPPFEN IELYNIMCDL LGLKPAPNNG THGSLNQLLR TPVYIPNMPE 540
  541 EVTKPNPAGP VIAINDDLGC TCEDKNKVDE LNQRLRQVID DNKNLPYGRP AVMFRTKYCI 600
  601 LHHTDYISGY SEALHMPLWT SYTVSKQVDF TPLTDALSNC IRPDSRVPTA YSQSCSNYRT 660
  661 EKQISYSFLY PPQLSSTQEA RYDAVLITNT VPMYAAFKRV WSYFQKSLVK RYASEKNGVN 720
  721 VVTGPIFDYD YNGLRDSAET IKQFVSGSVQ IPTHYFVVVT SCLDYTQTVD SCVGPLSVFS 780
  781 FILPHRSDNE ETCNSSEDES KWVEELMKTH TARLRDVELL TGLDFYRRTS RTYEEILALK 840
  841 TYLHTYESEI 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle