YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|46309569, gi|...
Protein type: Transmembrane
Type Confidence: 0.74
Topology Confidence: 0.73
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQWRRRHCCP IKMTWNVKRS LFRTHVAGLL SLASLFALFL IYCHQDLLQG RSWLRDNPLV  60
   61 YTMRGLRPHK ERAKGNQSTL RSLWKDNTYV LPKPSVNFNF SSHQAEITAR GIVGLEISPS 120
  121 SNNSNTIGNT KSLHREMGVG GRLAAQPYHW LLNEPYKCNE SSPFLVLLIA AEPRQLEARN 180
  181 AIRQTWGNES VAMGYGFVRL FLLGRIPNAY PQSSVDEESL QHHDIIQQDF LDTYYNLTIK 240
  241 TLMGMSWVAR YCPHARYVMK TDSDMFVNTE YLIQKLLKPN TAPRQNYFTG YLMRGYAPNR 300
  301 NKDSKWYMPP ELYSIERYPI FCSGTGYVFS GDMAAKIYNA SLSIRRLHLE DVYVGICLAK 360
  361 LRIDPVPPPN EFLFNHWRVS YSSCKYSHLI TSHQFQPNEL MKYWNHLQSN KHNPCLNMAK 420
  421 DRSGRPRHRK LQWEGLR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle