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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|38198629, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.36
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMEAVSFDGD NDMSYEDSES PLPSPFTLTP AAHKGSYDLE QVRQQGEEQP QTFTFNRDLE  60
   61 AARNTNTNAI KRGDAESYVE LNELRGEIWQ ETGRWVGFEE NFSPATGQWS QSHVSYLTFK 120
  121 SLIQLRKVMS TGAVLLDVDD SSLSSIGQKM VEQLLLKKEI RPSDRDALVT ILQRKRSQLE 180
  181 PVVSPGSADL ELQTFSVTKQ RDQVDRVEGS VVLSGVVENL QKPVVAFARL RDSVVMEGVL 240
  241 EASIPVRFVF FLVGPSHSGM DYHESGRAMA ALMADWVFSL EAYLATNERD LYNAMADFMD 300
  301 CSIVIPPTDI QDDSMLKPII NFQKKMLHDR VRPYDTRIMV GGKAPTGPAK PREDPLARTG 360
  361 LPFGGMVKDI KRRYKHYLSD FTDALDPQVL SAVIFIYFAA LSPAITFGGL LADKTEHMMG 420
  421 VSEMMVSTCV QGVIFCLFAA QPVLVIGFTG PLMVFEEAFF QFCKGYGFEY IVGRVWVGMW 480
  481 LIVIVVIIMA VEGSFLVRFI SRFTQEIFSI LISLIFIYET FSKLIKIFKA HPLILNYEHL 540
  541 NDSLDDPFHP IKKVINVTLH PDGNVTEHHE IIERAYPNTA LLSMCLMFGC FFIALYLRGF 600
  601 KTSTYLPGPI RRMVGDFGVP IAIFFMIAVD ISISDAYTQK LVVPKGLTVS NTSARGWFIS 660
  661 PFGEKKTFPV WMMFACVVPA MLVFILIFLE SQITTLIVSK PERKMVKGSG FHVDLLLLVF 720
  721 LGGVGSLFGV PWLSAATVRS VTHANALTVM TKGPRPQIER VLEQRVSGIL VAVMVGVSIL 780
  781 MEPILKMIPM TALFGIFLYM GITSLSGIQL WDRMLLLITP KKHHPAVPYV TRVPTMRMHL 840
  841 YTLIQVMCLA LLWVVKSSNF SLALPFVLIL TIPLRMFMTG HVFTVMEMKC LDADDANVKF 900
  901 DDEDD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle