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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|33327156, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MILSGLLLPA LWGLALGGSP SVQIGGLFPR GADQEYSAFR IGMVQFGTAE FRLTPHIDNL  60
   61 EVANSFAITN CFCSQFSRGV YAIFGFYDKK SVNTITSFCE TLHVSFITPS FPADGLNQFV 120
  121 LQMRPDIKGP LISLVEYYKW EKFAYLYDSD RGLSTLQAVL DTAAERKWQV TAINVGNLKD 180
  181 EWKDEAYRSL FQDLENKNER RVILDCEQDK VKDIMEQVIT IGRHVKGYHY IIANFGFVDG 240
  241 DLSKIQYGGA NVSGFQIVDF DDPLVAKFDQ RWEALEEKEY PGADSRIRYT SALTYDAVQV 300
  301 MTEAFRFLHK QRIDISRRGN NGDCLANPAV PWAQGVEIER ALKQVRVDGL TGNIQFDQYG 360
  361 RRVNYTVNVM ELKNSGPVKI GYWNEMDKMA VTKSDLFPND TMGMENKTVI VTTILEAPYV 420
  421 MLKKNAELFT DNERYEGYCV DLAAEIAKHC GFKYQLRIVA DGKYGARDAE TKIWNGMVGE 480
  481 LVYGKADIAV APLTITLVRE EVIDFSKPFM SLGISIMIKK PQKSKPGVFS FLDPLAYEIW 540
  541 MCIVFAYIGV SVVLFLVSRF SPYEWHTEEF EDGQLGPSES TNEFGIFNSL WFSLGAFMRQ 600
  601 GCDISPRSLS GRIVGGVWWF FTLIIISSYT ANLAAFLTVE RMVSPIESAE DLAKQTEIAY 660
  661 GTLDAGSTKE FFRRSKIALF DKMWQYMKSA EPSVFVKNTV EGVLRVRKSK GKYAYLLEST 720
  721 MNEYIEQRKP CDTMKVGGNL DSKGYGIATP KGSALRNAVN LAVLKLNEQG LLDKLKNKWW 780
  781 YDKGECGSGG GESKEKTSAL SLSNVAGVFY ILVGGLGLAM LVALVEFCYK SRAEAKRMKV 840
  841 AKTQALNPSS SSQNSQNFAT YKEGYNVYGL ESVKI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle