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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|124297207, gi...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLPKLQTLPR LLPLALASVF LVQSGTSDKE VRPEAWLQQY GYLPPGDVRA QAIRSPKSIN  60
   61 SAISAMQKFY GLTVTGTMDP ATLSAMQRPR CGVPDKFGSE LKSNLRKKRY VAQGSKWDKR 120
  121 EVTFSIQNYT PKVGERATHE AIKKAFRVWE AVTPLKFREI PYSQINGKVE KFADIMLFFA 180
  181 EGFHGDSTPF DGEGGFLAHA YFPGHGIGGD THFDEAEPWT TGNVDKGGND VFLVAVHELG 240
  241 HALGLEHSGD PSAIMAPFYQ WMDTENFVLP EDDRRGIQQI YGAGSEDKPQ PPAPRPPTRT 300
  301 PDRPSFGPDI CEGHFDTIAF LRGEMFVFKE KWFWRVRDGK PQQGYPMPIG HFWKGLPPSI 360
  361 NAAYERNDGK FVFFKGDKYW VFNEAKMEEG YPKTFKELGT GLPRDKLDAA IFYTPTGNTY 420
  421 FFRGTKYYRF NEESRSVDSD YPKDIGVWQG VPDNVKGAFM SEDGANAYFY KANKYWKFNN 480
  481 QQLKVEPGFP KSVLTNWMGC EAEEPKRRAG TDEEVLIIEV DGSEGGAMGG AAAIVIPLFL 540
  541 LACVLVTLGA LLFFRRYGTP RRLLYCHRSL LDKV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle