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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|33327160, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.83
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRRRAHASVL LLPWLVLQTQ AGFPNQINIG GLFMRSTVQE HSAFRFAVQL YNTNQNITEK  60
   61 PFHLNYNVDN LESSNSFSVT HAFCSQFSRG VYAIFGFYDR RSMNTLTSFC GALHTSFITP 120
  121 SFPTDTDVQF VLQMRPSLRG ALLSLLAHYK WEKFVYLYDT DRGFSILQAI MESAVMNNWQ 180
  181 VTARSVGNIV DPLEYRRIIE EMDRRQEKRF LIDCEVERIN SILEQVVIAG KNSRGYHYIL 240
  241 ANLGFTNMSL DKVFPGGANI TGFQIINPDS PIVQQFLQRR ERLDEREFPE SRSSPLKYTS 300
  301 ALTHDAILVI AEAFRYLRRQ RVDISRRGSA GDCLANPAVP WSQGIDIERA LKMVQVQGMT 360
  361 GNIQFDSFGR RSNYTVDVYE MKPGGARKIG YWNEFEKFVY IVEQQVTNES SSVENRTIVV 420
  421 TTIMEAPYVM YKRNYMQLEG NDRYEGYCVD LASEIAKHVG IKYKLSIVAD GKYGARDPET 480
  481 KTWNGMVGEL VYGRADIAVA PLTITLVREE VIDFSKPFMS LGISIMIKKP QKSKPGVFSF 540
  541 LDPLAYEIWM CIVFAYIGVS VVLFLVSRFS PYEWHLDDNE ETKDPQTPPD PPNDFGIFNS 600
  601 LWFSLGAFMQ QGCDISPRSL SGRIVGGVWW FFTLIIISSY TANLAAFLTV ERMVSPIESA 660
  661 EDLAKQTEIA YGTLDSGSTK EFFRRSKIAV YEKMWSYMKS AEPSVFVKTT PDGVARVRKS 720
  721 KGKFAFLLES TMNEYIEQRK PCDTMKVGGN LDSKGYGVAT PKGSALRTPV SLAVLKLSEQ 780
  781 GILDKLKNKW WYDKGECGTK DSVSKDKTSA LSLSNVAGVF YILVGGLGLA MTVALVEFCY 840
  841 KSHQETKRLK LAKNAQNFKP APPSTAQSFA TYREGYNVYG TESVKI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle