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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|18858449, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.77
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRMRILLCLL SLSFLALSNA LGGDVCESGH DSGPVFEEQP SSLIYPEGMP EGKVTLGCQA  60
   61 RSSPAAVYRW RVNGTDISFA EESHYTQVAG NLVINNPQNG RDGGSYQCLA INRCGTIVSR 120
  121 VANLKFGYLR DFPPESRSPQ TVHEGMGTFL ACQPPAHYPA LSYRWFINEF PNFIQPEAGR 180
  181 WFVSQVTGNL YLANARANDT GNYFCFTTIN MDVSTKSIFS KAVQLTVHPD ASPRKTAPNI 240
  241 RVRFPAETYA LSGQTAQLEC FAYRNPIPKI RWRKVDGILP PKVGTSVDGP ILIIPELNFD 300
  301 DEGMYECEVY NSEGRETHQG RVSVQAQPDW LQVMSDSEVE ISSELQWSCA AAGKPRPTIR 360
  361 WLRNGHALIT QDRVEVNNGR LKIANLALED SGMYQCVAEN KHSTIYSNAE LRVQVQAPDF 420
  421 RLNPVRKLVP AARGGQVKME CKPRAAPKPT LFWSRGTELL TNSTRITVTP DGILWIYNIS 480
  481 RADEGKYTCF AENYLGKANS TGHLSVRDAT KITLAPSNAD INQGENATLQ CHASHDPTMD 540
  541 LTFTWSLNGV PLDLEEPNGH YRRMEGKETI GDLVIVNGQL SHAGTYTCTA QTVVDSAMAS 600
  601 AKLVVRGPPG PPGGLVVTSV NDTSVELRWS RGYDNHSPIG KYVILGRSSQ THDWKRMRTD 660
  661 PANIEGNAES ARVIDLRPWM DYEFQVIASN ILGSGEPSMP SPRAQTKEAA PTVAPSGLGG 720
  721 GGGNRNELII TWTPMAREYQ NGDSFGYILA FRKQGIPTWT VVKVPNVESS RYVYSNDSLT 780
  781 AYCPFEVRIK AYNKKGEGPF SQIAVVHSAE EEPTVSPRWI NATALTAFEI QVSWEPIQHL 840
  841 NINGVLRGYE IRYWRQHERE AAADRVRTAG LENTARVTGL RPNTLYHITV LAYNSAGTGP 900
  901 ASPRTTVITK KPPPNRPPGN VSWKVDGSWV TVRWDHVKSM DNESAVLGYK VLYKHEGQSA 960
  961 LKVLEKSKTS VKLPLPKDNG YVVLEIRSWG DGGDGAAHET IVSRDSGTGM MVQNSSGNWR1020
 1021 TPCWSLLLFT ALALIGSSGL 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle