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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|14582860, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.82
Topology Confidence: 0.70
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKMIVVFTVC MSVVVLASAQ ADQKSKNCNE VRTAYSSKGF NVNDVPNKGV QGAHLKVCPQ  60
   61 GFSCCTLEME EKLSQLSRVD LKVPVHQLSS NLQSTFTQRH RHFDQFFREL LDNAEKSLNH 120
  121 MFVRTYGLMY VKNKELFEGF FSDLRRYYSH GSSEVNLDDM LAEFWSELLE RMFRLVNVQY 180
  181 EFSDSYMECV SRHTDQLKPF GDVPRKLRLQ LTRSFIAVRA FTRGLTLMPD VVRKVSTVSA 240
  241 SPSCVRASMK MLYCPYCSGQ VALKPCKNYC LNVMRGCLAN QADLDTEWNN FLDSMLGLAE 300
  301 RLEGPFNFES VVDPIDVKIS DAIMNMQENS MQVSQKVFQG CGQPKLSMGF RSRRSAKDSG 360
  361 FPGRFRPYSP EARPTTAAGT TLDRLLTDVK KKLKHAKKFW STLPDTVCVG ERIAPSDDCW 420
  421 NGTAKSRYES VVMSSGLANQ VSNPDVEVDI TKPDMVIRRQ IAVLKEMTSW LKAAYTGNDI 480
  481 SFTSDDAGSG EESGSGCDSP SCEGDGDIYF STPAPGKPRI LKTQEVEQAS SGTRLAPCSL 540
  541 ALALASLLLT LLTLQTR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle