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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|51460997
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.53
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMERIRKEMI LMERGLHSPT AGKRFSNLSN SAGNAVLEAL ENSQHPARLS PRLPSAPLHS  60
   61 ALGELPAKGK FEIDTLFNLQ HTGSESTVSS EISSAAESRK KPGHYSEAAA EADMSSDVEV 120
  121 GCSALRSPGG LGAAQLKENN GKGNRAGRTA LSSPILFAPP RPPPAFPGAF SPLRPSTGKL 180
  181 HRASTGGGGT HVWDRAFQFC SLSFPARLRP AEPGTPGPPA LAPESEKMFL RSCLRARASR 240
  241 AGGGILLGKS EEASPASLFR SAGERVEKYI SPPIGLATLL PDGASPIRAQ RQRRAVGPTA 300
  301 THALLVVCLP GYAESGSAAG TTTSASGSGL GSLHGGSGGS GGSAALGGSG SGADQVRRYR 360
  361 TAFTREQIAR LEKEFYRENY VSRPRRCELA AALNLPETTI KPEEQQQPDA GERTLFVEDG 420
  421 VPTAVHTLPS TLSQLGDHRV LGVGLGRREV DQAIQRSGRG RGPGTGAGNT GRSLTQAAAR 480
  481 LSPQVWFQNR RMKDKRQRLA MSWPHPADPS FYTYMMTHAA ATGSLPYPFH SHVPLHYYPH 540
  541 VGVTAAAAAA AASGAAAAAS SPFATSIRPL DTFRALSHPY SRPELLCSFR HPGLYQAPAA 600
  601 AAGLNSAASA AAAAAAAAAA ASSAAAAGAP PSGGSAPCSC LSCHSSQSAA AAAAAAAAAL 660
  661 GSRGGGGGGG GGGGGGGGGA GAGGGSDFGC SAAAPRSESG FLPYSAAVLS KTAVSPPDQR 720
  721 DEAPLTR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle