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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|40556304, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLAQRSWAL GCTAIMSVLQ MAMAGNPNWM LNGKAQVLAD LSAQEIQAVH SFLMSRTELD  60
   61 LQPSDTRALD KNSVLLIETL LPKKKDVLEF LNKETKAPVR EARVIVFFSA QEHPNVTEFA 120
  121 VGPLPQPIYM RELSPRPAKH RSWASRPMCK AEQSLLYHKV KEATTPLREL FLHTTGFSLE 180
  181 DCNGQCLTFT HVAPHSVESR HRATWFLLQR IVKEHLLQPT GLEILVDHGS TDVRDWRVVQ 240
  241 VWYNGKQYNS PEELAQKYAD GEVDTMVLKD LLPKNTELPP IFNKPGGKFP TPLRKSGPHV 300
  301 EQANGSRYSL EGNTVIYKDW SFSFQLRPSS GLHILNVHFR NEYIAYEISV QDAVAVHREK 360
  361 TPAGELTKTM DLGWGLGSVT RELAPGINCP ETATFLDVIH YYDTDGPVRY PRALCIFEIP 420
  421 TGMPVRPTFN HFAGKINFFS DVMGHKLVLR ATSALYNFDY IWDFIFYSSG MISAKVHATG 480
  481 YVHTTIYTRE GLGETHLLTH QLGHSHTHLV HYRVDLDVAG INNSFHTLQT RQKNTTNSSS 540
  541 PRRLVQDIME KTQYSQERQA TFSFGHTLPS FLLFSSPKKD IWGYRRSYRL KIYSTSEQSL 600
  601 TPETQEDLAF SWARYSLAVS KYSDSERYST SIYNQNHPWD PPVVFEDFLQ NNENIDDQDL 660
  661 VAWVTVGFSH GPHSEAVPYM ASSRNFVGFL LLPFNFFYIT EKNLSTSAAD VADTGFLEAG 720
  721 SA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle