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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|37693512, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.80
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVLCSRTLHP LSLLVQAAVL AEALALGTLP AFLPCELKPH GLVDCNWLFL KSVPHFSAAE  60
   61 PRSNITSLSL IANRIHHLHN LDFVHLPNVR QLNLKWNCPP PGLSPLHFSC RMTIEPKTFL 120
  121 AMRMLEELNL SYNGITTVPR LPSSLTNLSL SHTNILVLDA SSLAGLHSLR VLFMDGNCYY 180
  181 KNPCNGAVNV TPDAFLGLSN LTHLSLKYNN LTEVPRQLPP SLEYLLLSYN LIVKLGPEDL 240
  241 ANLTSLRVLD VGGNCRRCDH APDLCTECRQ KSLDLHPQTF HHLSHLEGLV LKDSSLHSLN 300
  301 SKWFQGLVNL SVLDLSENFL YESINKTSAF QNLTRLRKLD LSFNYCKKVS FARLHLASSF 360
  361 KSLVSLQELN MNGIFFRLLN KNTLRWLAGL PKLHTLHLQM NFINQAQLSV FSTFRALRFV 420
  421 DLSNNRISGP PTLSRVAPEK ADEAEKGVPW PASLTPALPS TPVSKNFMVR CKNLRFTMDL 480
  481 SRNNLVTIKP EMFVNLSHLQ CLSLSHNCIA QAVNGSQFLP LTNLKVLDLS YNKLDLYHSK 540
  541 SFSELPQLQA LDLSYNSQPF SMQGIGHNFS FLANLSRLQN LSLAHNDIHS RVSSRLYSTS 600
  601 VEYLDFSGNG VGRMWDEEDL YLYFFQDLRS LIHLDLSQNK LHILRPQNLN YLPKSLTKLS 660
  661 FRDNHLSFFN WSSLAFLPNL RDLDLAGNLL KALTNGTLPN GTLLQKLDVS SNSIVFVVPA 720
  721 FFALAVELKE VNLSHNILKT VDRSWFGPIV MNLTVLDVSS NPLHCACGAP FVDLLLEVQT 780
  781 KVPGLANGVK CGSPRQLQGR SIFAQDLRLC LDDVLSRDCF GLSLLAVAVG TVLPLLQHLC 840
  841 GWDVWYCFHL CLAWLPLLTR GRRSAQALPY DAFVVFDKAQ SAVADWVYNE LRVRLEERRG 900
  901 RRALRLCLED RDWLPGQTLF ENLWASIYGS RKTLFVLAHT DKVSGLLRTS FLLAQQRLLE 960
  961 DRKDVVVLVI LRPDAHRSRY VRLRQRLCRQ SVLFWPHQPN GQGSFWAQLS TALTRDNHHF1020
 1021 YNRNFCRGPT AE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle