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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: IC1_RAT
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASKLTPLTL LLLLLAGDRA FSDSEVTSHS SQDPLVVQEG SRDSVPERDG SRSPIEHTGQ  60
   61 SSTWPTTSGS TKISNDTMDQ VANESFIQHV QPAAQLPEDS PSQSPVNSSS PPSTASAPPT 120
  121 QAPTEPLCPE PLAWCSDSDR DSSEATLSEA LTDFSVKLYH AFSATKKAET NMAFSPFSIA 180
  181 SLLTQVLLGA GDSTKSNLED ILSYPKDFAC VHQTLKAFSS KGVTSVSQIF HSPDLAIRDT 240
  241 YVNASLSLYG SSPRVLGPDG DANLKLINTW VAENTNHKIN ELLDSLPSDT RLVLLNAVYL 300
  301 SAKWKKTFEQ KKMMASFLYK NSMIKVPMLS SKKYPLALFN DQTLKAKVGQ LQLSHNLSFV 360
  361 IMVPQSPTHQ LEDMEKALNP TVFKAILKKL ELSKFQPTYV MMPRIKVKSS QDMLSIMEKL 420
  421 EFFDFTYDLN LCGLTEDPDL QVSSMKHETV LELTETGVEA AAASTISVAR NLLIFEVQQP 480
  481 FLFLLWDQRH KFPVFMGRVY DPRA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle