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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|47482127, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.76
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMLDHTRAPE LNIDLDLHAS NSPKGSMKGN QFKEQDPCPP QPMQGLGKGD KREEQGLGPE  60
   61 PSAPRQPTEE EEALIEFHRS YRELFQFFCN NTTIHGAIRL VCSKHNRMKT AFWAVLWLCT 120
  121 FGMMYWQFAL LFEEYLSYPV SLNINLNSDK LVFPAVTVCT LNPYRYTEIK EELEELDRIT 180
  181 EQTLFDLYKY NSSYTRQAGA RRRSSRDLLG AFPHPLQRLR TPPPPYSGRT ARSGSSSVRD 240
  241 NNPQVDRKDW KIGFQLCNQN KSDCFYQTYS SGVDAVREWY RFHYINILSR LSDTSPALEE 300
  301 EALGNFIFTC RFNQAPCNQA NYSKFHHPMY GNCYTFNDKN NSNLWMSSMP GVNNGLSLTL 360
  361 RTEQNDFIPL LSTVTGARVM VHGQDEPAFM DDGGFNLRPG VETSISMRKE ALDSLGGNYG 420
  421 DCTENGSDVP VKNLYPSKYT QQVCIHSCFQ ENMIKKCGCA YIFYPKPKGV EFCDYRKQSS 480
  481 WGYCYYKLQG AFSLDSLGCF SKCRKPCSVI NYKLSAGYSR WPSVKSQDWI FEMLSLQNNY 540
  541 TINNKRNGVA KLNIFFKELN YKTNSESPSV TMVSLLSNLG SQWSLWFGSS VLSVVEMAEL 600
  601 IFDLLVITLL MLLRRFRSRY WSPGRGARGA REVASTPASS FPSRFCPHPT SPPPSLPQQG 660
  661 MTPPLALTAP PPAYATLGPS APPLDSAAPD CSACALAAL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle