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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|40445399, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.96
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLVGRILTL GWMTAILVVQ MSVAEHSRWA LNTRPRVLWD LSAEELECVH NFLMSRKELE  60
   61 LQPSTVLTLA KNSVFLIEML MPKKYEVLDF LDKGAMPPLR EARVLIYFGA QEYPNVTEYA 120
  121 VGPVDQPMYM RKLNRKGGQE LSWVSRPMSK VESALLFHTL KTATKPLQEF FFDTTGFTLQ 180
  181 DCNGGCLTFT NVGPRDMTFR NRHSWFLLQR FMNGHFLQPT GLEILVDHGS TDVQDWRVVQ 240
  241 IWYNGKFYSS PEELAQKYAD GEVDIVVLED PLPKTSEQFP QFSTYKPHAE FLMPISKGGP 300
  301 RVVQPYPEFP MPIRKGGPRV AQPYPEFSMP ISKGGPRVPQ PYSEFSTPIR KGGPRVPQPY 360
  361 SEFPTPIRKG GPQVAQPYPE FSIPISKGGP RVPQPYSEFP TPIRKGGPRV PQPYSEFPTP 420
  421 IRKGGPRVPQ PYSEFPTPIR KGGPQVTHPY SEFPTPISKG GPQVAQPYPK FPRPISKGGP 480
  481 QVAQLYPKFP TPIRKGGPQV AQSSVPRYRL KHNTVLYGDW SFFFKLQSSY GLQLFNVHFR 540
  541 GERIAYEVGV QEVMALYKGH KAGGRETKYV DVGWGLGGIT HQLTPGIDCP HKATFLDAIH 600
  601 YYDSDGPVLS RQALCIFEVP VGVPLRHYFN SNFRSSFSSY ARLGGPMLVL RTASTIHNHD 660
  661 YIWDFIFHSN GIMEGKMYAT GYVHATFYTS EGMLYHSRLH THLLGNVHSH LAHYRIDLDV 720
  721 AGTKNSFQTL KMRLENITDP WSQRSQQVKP IFDKTQYSQE RQAAFHFRQT LPKYLLFSNT 780
  781 GKSVLGRSHS YLLHVPSMAE QMLPPGWQNS PAFLWPRYQL AVTKYQESER FHSSLYNQNH 840
  841 HWAYPMVFEN FIHNNENIED EDLVAWVTVG LSNNLHSEIA PSTATLGNAA GFLLQPFDLY 900
  901 NNFQRYTASP TRAQCVC

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle