YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|38541416, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSSIFILSL FLLLERQAAV VGQYGGTKGH FQSSSSGFML GQKGHLNFGL KGGSEEAAEE  60
   61 SIFMQSQHQM FGQDGGDMAQ TSVSQEHTGV KGAAICRKGQ VSQLKSQESQ IKSFRQVKSS 120
  121 GQLKSGGSQL KSFGQVKSSE SQLKSFGQVK ASGSQLKSFG QVKASGSQLK SYGQMKSSGS 180
  181 QVKSFGQMKS SGSQVKSFGQ MKASESQIKS FGQRKSQGGQ LQSYGQMKSY GQTKSLESQA 240
  241 KSFGQVKSQS GQMKSSYGQR KSYGEETQLK SFDQDAQLKS YGQQKSQKQS SFSQVKSQSA 300
  301 QLKSFGQQKS LKGFSQQTQQ KGFAMDEDLS QVRKQFDDDD LSVQQKSTQQ MKTEEDLSQF 360
  361 GQQRQFGQER SQSYKGYLAQ YRKKLQEQQQ QKNFNQDNFF TKGGAGLYQA QLKG

Type	Start	End	Confidence
Signal Peptide	1	18	0.99
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	414	0.99