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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|34873270, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLFLALAGL LAPLAMLQTS TGATPALPGE VANSVVLDCM EEAKRLVNKA YKERRESIKQ  60
   61 SLRSGSASPM ELLSYFKQPV AGTRTAVRAA DYLHVALDLL KRKLQPLWPR PFNVTDVLTP 120
  121 AQLNLLSVSS GCAYQDVGVT CPPQDKYRTI TGHCNNRRSP TLGASNRAFV RWLPAEYEDG 180
  181 ISLPFGWTPK VNRSGFKVPL ARQVSNAIVR FPNDQLTKDQ ERALMFMQWG QFLDHDITLT 240
  241 PEPATRFSFL TGLNCETSCL QQQPCFPLKI PPNDPRIKNQ KDCIPFFRSC PACTGSNITI 300
  301 RNQINALTSF VDASGVYGSE DPLARRLRNL TNQLGLLAVN TRFQDNGRAL LPFDSLHDDP 360
  361 CLLTNRSARI PCFLAGDMRS SEMPELTSMH TLFVREHNRL ATELKRLNPR WNGEKLYQEA 420
  421 RKIVGAMVQI ITYRDYLPLV LGPAAMKKYL PQYRSYNDSV DPRIANVFTN AFRYGHTLIQ 480
  481 PFMFRLDNQY RSTGPNPRVP LSRVFFASWR VVLEGGIDPI LRGLMATPAK LNRQNQIAVD 540
  541 EIRERLFEQV MRIGLDLPAL NMQRSRDHGL PGYNAWRRFC GLPQPSTVGE LGTVLKNLEL 600
  601 ARKLMAQYGT PNNIDIWMGG VSEPLEPNGR VGQLLACLIG TQFRKLRDGD RFWWENPGVF 660
  661 SKQQRQALAT ISLPRIICDN TGITTVSKNN IFMSNSHPRD FVSCNTLPKL NLASWKET

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle