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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|34862223, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.88
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGVQRRCFLP VLVLGALLAL GSIEGSRNQN WHGVSRQLVT KVWNKQLYPE WTEVQGSNCW  60
   61 RGGQVSLKVR NDGPTLVGAN TSFSIALHFP GSQKVLPDGQ VIWVNNTIIN GSQVWGGQPV 120
  121 YPREPDDACI FPDGGPCPSG PKPPRRSFVY VWKTWGQYWQ VLGGPESKLS IPTGHARLGT 180
  181 HTMEVTVYHR RGSQSYVPLA HSSSTFTITD QVPFSVSVSQ LQALDGENKR FLRNHPLIFA 240
  241 LQLHDPSGYL AEADLSYTWD FGDSTGTLIS RAPDVTHTYL EPGSVTAHVV LQAAIPLVSC 300
  301 GSSPVPGTTD GYVPTAEPPG TTPRQGATTK GQMPTTEPPG TTVVPTTEVT ATTSEQMLTS 360
  361 AVTDTTLAEM STPESTTPAR PSGTTVAQAT ITELVRTTAE ELPTPKPEGS DASPLLPTPS 420
  421 STGSVSRLLD DTDTIMLVKR QVPLDCVLYR YGSFSLTLDI VQGIESAEIL QAVPSSEGDA 480
  481 FELTVSCRGG LPKEACMDIS SPGCQPPAQR LCQPVPPSPD CQLVLHQILK GGLGTYCLNV 540
  541 SLADANSLAV ASTQLVVPGQ EGSLGQAPLL VGVLLVLVAV VLASLIYRHR LKKQDSVSQT 600
  601 PHGSTHWLRL PPVFCARRLG ESSPLLSGQQ V

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle