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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CCNL2_RAT
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAAAAGASG LMAPALAACS SGSGGAAPGS QGVLIGDRLY SGVLITLENC LLPDDKLRFT  60
   61 PSMSSGLDID TETGLRVVGC ELIQAAGILL RLPQVAMATG QVLFQRFFYT KSFVKHSMEH 120
  121 VSMACVHLAS KIEEAPRRIR DVINVFHRLR HLREKKKPVP LVLDQEYVNL KNQIIKAERR 180
  181 VLKELGFCVH VKHPHKIIVM YLQVLECERN QHLVQTAWNY MNDSLRTDVF VRFQPESIAC 240
  241 ACIYLAARTL EIPLPNRPHW FLLFGATEEE IQEICFKILQ LYTRKKVDLT HLESEVEKRK 300
  301 HAIEEAKARA KGLLPPGSAP GLDSATAGFS PAPKPESPKE GKGSKSSPLS VKNAKRKMEG 360
  361 PKKAKGDSPV NGLLKGQESR SQSRSREQSY SRSPSRSASP KRRKSDSGST SGGSKSQSRS 420
  421 RSRSDSPPRQ VHRGAPYKGS EVRGSRKSKD CKHLTQKPHK SRSRSSSRSR SRSRERTDSS 480
  481 GKYKKKSHYY RDQRRERSRS YERTGHRYER DHPGHSRHRR 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle