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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SYPM_RAT
Protein type: Globular with Signal Peptide
Type Confidence: 0.81
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEGLLTRCRT LSALATCSLR HSRCIVRKCY HCAPGRGQRL VVSRMFQPQN LREDQVLSLE  60
   61 GRASDLTCKS QRLMLQVGLI LPASPGCYHL MPYTVRAVEK LVRVIDQEMQ AIGGQKINMP 120
  121 SLSPAELWRA TGRWDLMGRE LLRLKDRHGK EYCLGPTHEE AVTALVASQK KLSYKQLPLL 180
  181 LYQVTRKFRD EPRPRFGLLR GREFYMKDMY TFDSSSEAAQ ETYSLVCDAY CRLFDRLGLR 240
  241 WMKARADVGS IGGTMSHEFQ LPVDIGEDRL VVCPSCHFSA NTEIVDLSQK ICPDCQGPLT 300
  301 ETKGIEVGHT FYLGTKYSSI FNAHFTNAHG ESLLAEMGCY GLGVTRILAA AIEVLSTEDC 360
  361 IRWPSLLAPY QVCIIPPKKG SKEAAATEIV ERLYDDVTEA LPQLRGEVLL DDRTHLTIGN 420
  421 RLKDANKLGY PFVIIASKRA LEDPAHFEVW SQNTGEVVFL TKEGVMELLT GVHVV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle