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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|34869009, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSYNVLLLA SLFLSLMLLC PVWAQFPREC ANIEALRSGV CCPDLFPSSG PGTDPCGSSS  60
   61 GRGRCVAVTA DSRPHSRHYP HDGRDDREGW PLRFFNRTCQ CNGNFSGHNC GACCPGWRGA 120
  121 ACNQKILTVR RNLLDLSTEE KSHFVRALDM AKRTTHPQFV IATRRSEDML GPDGSTPQFE 180
  181 NISIYNYFVW THYYSVKKTF LGAGQESFGD VDFSHEGPAF LTWHRYHLLQ LERDIQEMLQ 240
  241 EPSFSLPYWN FATGKNICDI CTDDLMGSRS NFDSTLISPN SVFSQWRVVC ESLEEYDTLG 300
  301 TLCNSTEGGP IRRNPAGNVG RPAVQRLPAP QDVTRCLEVR VFDTPPFYSN STNSFRNTVE 360
  361 GYSDPTGKYD PAVRSLHNLA HLFLNGTGGQ THLSPNDPIF VLLHTFTDAV FDEWLRRYNA 420
  421 DISTFPLENA PIGHNRQYNM VPFWPPVTNT EMFVTAPDNL GYAYELQWPG QEFTVSEIIT 480
  481 IAVIAGLLLV AAIFGSASCL IRSRSTKNEA NQPLLTDHYQ RYAEEYEELP NPNQTMV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle