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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|34866106, gi|...
Protein type: Transmembrane
Type Confidence: 0.73
Topology Confidence: 0.61
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGIRLSPLGV AVFFLLGLGV LYHLYSGFLA GRFSLFGLGG EPAGGAAEVA VDGGTVDLRE  60
   61 MLAVAVLAAE RGGDEVRRVR ESNVLHEKSK GKTREGAEDK MTSGDVLSNR KMFYLLKTAF 120
  121 PNVQDVNSQG GLGNLEYTGA GVSLTLGSSP VAAYVYKTHK SSYTVYIEEK AVGTGLCLVA 180
  181 IASITLTSCP VPITHQCLLP NALLLWEQTR NALHLASTFV ISRPCSILCL PPPVWQSYTD 240
  241 RYTELNASTA SMINTEEHVD ASDKEVIVWN RKIPEDILKE IAAPKEVPAE SVTVWIDPLD 300
  301 ATQEYTEDLR KYVTTMVCVA VNGKPVLGVI HKPFSEYTAW AMVDSGSNVK ARSSYNEKTP 360
  361 KIIVSRSHAG MVKQVALQTF GNQTLIIPAG GAGYKVLALL DVPDMTQEKA DLYIHVTYIK 420
  421 KWDICAGNAI LKALGGHMTT LSGEEISYTG SDGIEGGLLA SIRMNHQALM LSSEVGEHSS 480
  481 HEGSALVTQA QKYSGVPTIL TFLVIVGGHP GTTWKVQAET IGIVLAATTY GGCVAPQCPK 540
  541 ISAGYLKSQS AKPLTPSAPS HITLPKASL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle